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481 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		BED
GSE252354	Trans-differentiation takes place without reprogramming of developmental-specific DNA methylation, a key determinant of stable cell identity [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	37	BED	Batia Azria	Sep 12, 2024
GSE252355	Trans-differentiation takes place without reprogramming of developmental-specific DNA methylation, a key determinant of stable cell identity	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	43	BED	Batia Azria	Sep 12, 2024
GSE243364	Whole genome bisulfite sequencing (WGBS) of intestinal organoids from mice with graft-versus-host disease	Methylation profiling by high throughput sequencing	Mus musculus	6	BED TXT	Tyler J Leach	Sep 11, 2024
GSE247855	FoxA1/2-dependent epigenomic reprogramming drives lineage switching in lung adenocarcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	70	BED BW COV TXT	Katherine Gillis	Sep 11, 2024
GSE244251	Genome-wide 5mC and 5hmC patterns determine unique transcriptional signatures,regulators and exon inclusion of neural cell types in mouse brain [Nanopore]	Methylation profiling by high throughput sequencing	Mus musculus	9	BED	Michelle Lynne Olsen	Aug 09, 2024
GSE241308	TET2 regulates histone H2AK119ub and leukemogenesis through LTR RNA m5C oxidation [seq_RNA-caRNA-m5C-MeRIP]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED TXT	Xiaoyang Dou	Jul 25, 2024
GSE271464	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates chromatin state and leukemogenesis [seq_RNA-caRNA-UBS-amplicon]	Methylation profiling by high throughput sequencing	Mus musculus	6	BED	Xiaoyang Dou	Jul 25, 2024
GSE241347	Chromatin-associated LTR RNA m5C oxidation by TET2 regulates leukemogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	291	BED BIGWIG BROADPEAK NARROWPEAK TXT	Xiaoyang Dou	Jul 24, 2024
GSE247068	MeRIP-seq data of MACO/R model mice at 0, 6 and 24 hours in the brain	Methylation profiling by high throughput sequencing	Mus musculus	16	BED	li bingwu	Jul 17, 2024
GSE240863	Single cell discovery of m6A RNA modifications in the hippocampus	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	43	BED CSV RDS TXT	Magdalena Justyna Koziol	May 07, 2024
GSE198005	Genome-wide bisulfite sequencing (GWBS) and RNA-seq in hippocampus of Neil1- and Neil2 deficient mice	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED TXT	Mingyi Yang	May 01, 2024
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE218001	Gut microbiota rewires host mRNA m6A epitranscriptomic landscape via bile acid metabolism	Methylation profiling by high throughput sequencing	Mus musculus	57	BED	Xiaoyun Wang	Apr 21, 2024
GSE157135	DEAD-box helicase 17 (DDX17) protects cardiac function by promoting mitochondrial homeostasis in heart failure	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BED SRA Run Selector	Yuxuan Zheng	Apr 07, 2024
GSE221470	TET activity propagates transcriptional memory through embryonic dormancy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	266	BED BW	Maximilian Stötzel	Mar 19, 2024
GSE212568	Landscape of TFs binding in mouse early embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	57	BED BEDPE BW	Gran Young	Mar 03, 2024
GSE248696	Landscape of TFs binding in mouse early embryos [Bisulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	2	BED	Gran Young	Mar 03, 2024
GSE212005	CDCA7-associated global aberranDNA hypomethylation translates to localized, tissue-specific transcriptional responses [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	4	BED BW	Lucia Daxinger	Feb 09, 2024
GSE248540	Single molecule DNA methylation reveals unique epigenetic identity profiles of T helper cells	Methylation profiling by high throughput sequencing Other	Mus musculus	14	BED	Hector Hernandez-Vargas	Jan 08, 2024
GSE164154	PDGFRα+ not CD137+ progenitors control visceral obesity via glucocorticoid mediated TEAD1 methylation state	Methylation profiling by high throughput sequencing	Mus musculus	2	BED BW SRA Run Selector	yifan lv	Jan 01, 2024