GEO Browser - GEO

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19 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing	Mus musculus		XLSX
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE135227	Oct4-mediated inhibition of Lsd1 activity promotes the active and primed state of pluripotency enhancers	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH TSV XLSX	Humaira Gowher	Jun 29, 2020
GSE158944	Genome-wide maps of Dnmt1-dependent DNA methylome in adipocytes	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	5	BEDGRAPH XLSX SRA Run Selector	Yoon Jeong Park	Mar 24, 2021
GSE183585	Salt induces hepatic inflammatory response through epigenetic modulation of SIRT3	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	BW XLSX	Peng Gao	Sep 01, 2023
GSE186260	The chemical reprogramming of unipotent adult germ cells towards authentic pluripotency and de novo establishment of imprinting	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	145	COV CSV TXT XLSX SRA Run Selector	Jiansen Lu	Feb 07, 2023
GSE158067	Single-cell multi-omics in human clonal hematopoiesis reveals that DNMT3A R882 mutations perturb early progenitor states through selective hypomethylation.	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	26	CSV MTX TSV TXT XLSX SRA Run Selector	Neville Dusaj	Jul 05, 2022
GSE199806	DNA methyltransferases 3A and 3B target specific sequences during mouse gastrulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	712	CSV TSV TXT XLSX	Amos Tanay	Nov 02, 2022
GSE216731	LN-stem, tumor stem, tumor terminally differentiated CD8 T cells from human kidney cancer	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	67	CSV MTX TSV XLSX	Haydn Kissick	Nov 03, 2022
GSE250192	Global epigenetic stability of liver-resident invariant natural killer T cells in response to cues capable of inducing transcriptional re-programming	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	H5 TSV TXT XLSX	Josep Garnica	Oct 02, 2024
GSE133515	Profiling of DNA Methylation during RANKL Induced Osteoclastogenesis using Whole-Genome Bisulfite Sequencing	Methylation profiling by high throughput sequencing	Mus musculus	3	XLSX SRA Run Selector	Ce Dou	Jun 04, 2020
GSE184814	Analysis of N6-methyladenosine Methylation Modification in Fructose-induced Non-alcoholic Fatty Liver Disease [MeRIP-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	16	XLSX SRA Run Selector	Yunchen Luo	Oct 06, 2021
GSE204872	Abnormal Transcriptome-wide of DNA demethylation in Folate deficiency caused neural tube defects [MeDIP]	Methylation profiling by high throughput sequencing	Mus musculus	3	XLSX	shan wang	Sep 20, 2022
GSE214483	Whole genome bisulfite sequencing (WGBS) and RNA-sequencing of preadipocytes from iWAT	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	8	XLSX	Sona Kang	Oct 03, 2023
GSE234147	HDAC6 deacetylates IDH1 to regulate the homeostasis of hematopoietic stem/progenitor cells [WGBS-seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	XLSX	hanxiao Yin	Jun 06, 2023
GSE242955	Egr2 deletion in autoimmune-prone C57BL6/lpr mice suppresses the expression of methylation-sensitive Dlk1-Dio3 cluster microRNAs	Methylation profiling by high throughput sequencing	Mus musculus	10	XLSX	Zhuang Wang	Dec 04, 2023
GSE256458	YTHDF1-CLOCK axis contributes to pathogenesis of allergic airway inflammation through LLPS [m6A-seq]	Methylation profiling by high throughput sequencing	Mus musculus	8	XLSX	Jing Wang	Mar 15, 2024