GEO Browser - GEO

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111 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing	Mus musculus		BW
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE98101	Spatial-temporal epigenetic landscape of mouse gastrula	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	120	BW TAGALIGN TXT XLS SRA Run Selector	Naihe Jing	Oct 07, 2019
GSE118785	H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	43	BW TDF SRA Run Selector	Kieran Campbell	Aug 30, 2019
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE130735	Genome-wide roles of DNA methyltransferases in mouse embryos	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	65	BW IGV TDF SRA Run Selector	Michael Weber	May 20, 2020
GSE137337	Epigenetic regulator function through mouse gastrulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	54	BW MTX TSV SRA Run Selector	Helene Kretzmer	Apr 07, 2020
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE145878	p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	74	BIGWIG BW NARROWPEAK	Stephen Nimer	Nov 03, 2021
GSE146250	Control of Foxp3 induction and maintenance by sequential histone acetylation and DNA demethylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	78	BED BW TSV	Beisi Xu	Dec 14, 2021
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021
GSE151426	Temporal evolution of cellular heterogeneity during the progression to advanced, AR-negative prostate cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	53	BW H5 TXT	Nicholas Brady	Apr 07, 2021
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE154521	Temporal Analyses of Cardiac Chromatin Accessibility, DNA Methylation and Epigenomic Structure Reveal Locus-Specific Regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	47	BW CGMAP TAR	Tom Vondriska	Dec 01, 2021
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE159043	H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BROADPEAK BW COV	Falong Lu	Jun 27, 2022
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE162724	germ cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	50	BW MTX TSV TXT	teissandier aurelie	Jan 25, 2022
GSE164265	Disordered N-Terminal DNMT3A Domain Is Required for Mouse Postnatal Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH BW TXT SRA Run Selector	Tianpeng Gu	Mar 21, 2022