GEO Browser - GEO

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108 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing	Mus musculus		TXT
GSE166423	5-hydroxymethylcytosine is required for terminal differentiation of Purkinje neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	TXT SRA Run Selector	Elitsa Stoyanova	Sep 01, 2021
GSE131902	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	57	BED TXT	Martin Bizet	Jul 16, 2020
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE86907	A novel requirement for Drosha in maintenance of mammalian CG methylation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	12	TSV TXT SRA Run Selector	Robert J Schmitz	Jul 27, 2017
GSE117732	A novel role for the conserved, orphan deaminase APOBEC2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT WIG	Nina Papavasiliou	Jul 26, 2021
GSE131678	A probabilistic framework for cellular lineage reconstruction using integrated single-cell 5-hydroxymethylcytosine and genomic DNA sequencing	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	16	TXT SRA Run Selector	Siddharth Dey	Jul 08, 2021
GSE155338	Aging of preleukemic thymocytes drives CpG island hypermethylation in T-cell acute lymphoblastic leukemia [RRBS_mouseTALL]	Methylation profiling by high throughput sequencing	Mus musculus	40	TXT SRA Run Selector	Juliette Roels	Sep 24, 2020
GSE150538	An activity-mediated transition in transcription in early postnatal neurons	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	191	BW TXT	Hume Stroud	Jun 25, 2020
GSE150534	An activity-mediated transition in transcription in early postnatal neurons [BS-seq]	Methylation profiling by high throughput sequencing	Mus musculus	22	BW TXT SRA Run Selector	Hume Stroud	Jun 25, 2020
GSE109965	Analysis of genetically diverse macrophages reveals local and domain-wide mechanisms that control transcription factor binding and function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	294	TXT SRA Run Selector	Christopher Glass	May 17, 2018
GSE105051	Ancestral perinatal obesogen exposure results in a transgenerational thrifty phenotype in mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	40	TXT SRA Run Selector	Raquel Chamorro-Garcia	Nov 10, 2017
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE129920	BCL6 de-repression induces the fasting transcriptome and protects from steatosis (ChIP-Seq II)	Methylation profiling by high throughput sequencing	Mus musculus	40	TXT SRA Run Selector	Grant D. Barish	Apr 17, 2019
GSE72860	Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Guoqiang Zhang	Sep 10, 2015
GSE107540	BisPCRSeq analysis of ribosomal DNA in mouse sperm exposed to protein restriction during different critical time windows	Methylation profiling by high throughput sequencing	Mus musculus	64	TXT SRA Run Selector	Amy Frances Danson	Apr 09, 2018
GSE183550	Chromatin state barriers enforce an irreversible mammalian cell fate decision	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	83	BED TXT	Andres Blanco	Dec 01, 2021
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184	BETA BIGWIG MTX TSV TXT SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE112320	Comprehensive analysis of H3K9me2 oocytes, together with DNA methylation and expression analysis of G9a conditional KO oocytes and maternal KO preimplantation embryos	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BEDGRAPH TXT SRA Run Selector	Wan Kin Au Yeung	Apr 02, 2019
GSE158185	DNA methylation analysis of synovial fibroblasts from mice undergoing collagen-induced arthritis (CIA) treated, or not, with the the helminth-derived immunomodulator, ES-62	Methylation profiling by high throughput sequencing	Mus musculus	3	TXT SRA Run Selector	Margaret M Harnett	Mar 01, 2021
GSE112525	DNA methylation in neurons from post-mortem brains in schizophrenia and bipolar disorder	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by array Genome variation profiling by SNP array	Homo sapiens Mus musculus	332	IDAT TXT	Shraddha Pai	May 03, 2019