GEO Browser - GEO

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45 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing	Mus musculus		BED
GSE131902	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	57	BED TXT	Martin Bizet	Jul 16, 2020
GSE131900	5hmC RNA role in mouse Embryonic stem cell differentiation to Embryonic bodies [hMeRIP-seq]	Methylation profiling by high throughput sequencing	Mus musculus	26	BED SRA Run Selector	Martin Bizet	Jul 16, 2020
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE117732	A novel role for the conserved, orphan deaminase APOBEC2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT WIG	Nina Papavasiliou	Jul 26, 2021
GSE165676	Animal models of neurodevelopmental disorders treated with TAK-418	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus Rattus norvegicus	119	BED	Satoru Matsuda	Jan 29, 2021
GSE100262	Base-resolution analysis of DNA methylation patterns downstream of Dnmt3a in mouse naïve B cells	Methylation profiling by high throughput sequencing	Mus musculus	6	BED BIGWIG SRA Run Selector	Paul A Wade	Jan 19, 2018
GSE112520	Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution	Methylation profiling by high throughput sequencing Other	Mus musculus	2	BED SRA Run Selector	Gergana Velikova	Dec 24, 2018
GSE104543	Characterisation of the effects of in situ fixation on DNA methylation levels	Methylation profiling by high throughput sequencing	Mus musculus	8	BED XLSX SRA Run Selector	Rachel Legendre	Nov 13, 2017
GSE183550	Chromatin state barriers enforce an irreversible mammalian cell fate decision	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	83	BED TXT	Andres Blanco	Dec 01, 2021
GSE69101	Comprehensive Epigenomic Analysis Reveals Dynamic Regulatory Programs Of Blood Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	77	BED BW	MS Vijayabaskar	Feb 25, 2016
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE224563	DNA methylation in the mouse cochlea promotes maturation of supporting cells and contributes to the failure of hair cell regeneration	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	BED BW COV H5 H5SEURAT MTX RDS TSV	John Duc Nguyen	Feb 07, 2023
GSE165675	DNA methylation profile in animal models of neurodevelopmental disorders treated with TAK-418	Methylation profiling by high throughput sequencing	Mus musculus Rattus norvegicus	18	BED SRA Run Selector	Satoru Matsuda	Jan 29, 2021
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021
GSE66847	Dynamics of 5-hmC in cardiac maturation and hypertrophy	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	34	BED BW	Paolo Kunderfranco	Jun 21, 2016
GSE122016	Effect of high-fat diet on hepatic DNA methylation in SM/J mice	Methylation profiling by high throughput sequencing	Mus musculus	16	BED SRA Run Selector	Madeline Keleher	Nov 26, 2018
GSE136010	Epigenomic analysis of Parkinson's disease neurons identifies TET2 loss as neuroprotective	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BED TXT	Lee Marshall	Jun 19, 2020
GSE81222	Erasure of Tet-oxidized 5-methylcytosine by a SRAP nuclease	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH BIGWIG TXT WIG SRA Run Selector	Douglas Edmund Feldman	Oct 10, 2017
GSE73014	Genome-wide DNA-methylation and transcriptome change due to lncRNA H19 knockdown in myotubes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	BED	Na Zhang	Nov 09, 2015