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298 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing	Mus musculus
GSE148742	High-throughput sequencing analysis of a “hit and run” cell and animal model of KSHV tumorigenesis.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30		Martin Carlos Abba	Apr 16, 2020
GSE192875	Transcriptional regulation of the thymus master regulator Foxn1	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	BROADPEAK BW NARROWPEAK	Jakub Abramson	Aug 03, 2022
GSE183556	MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	550	BEDPE TXT	Asifa Akhtar	Aug 10, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE158378	Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	14	BED TXT SRA Run Selector	Adi Alajem	Sep 23, 2020
GSE205097	Genome-wide assessment of DNA methylation alterations induced by superovulation, sexual immaturity and in vitro follicle growth in mouse blastocysts	Methylation profiling by high throughput sequencing	Mus musculus	23	COV	Simon Richard Andrews	Jan 19, 2023
GSE223571	Dynamic DNA methylation turnover at the exit of pluripotency epigenetically primes gene regulatory elements for hematopoietic lineage specification [HMCP]	Methylation profiling by high throughput sequencing	Mus musculus	11	TXT	Simon Richard Andrews	Jan 24, 2023
GSE223578	Dynamic DNA methylation turnover at the exit of pluripotency epigenetically primes gene regulatory elements for hematopoietic lineage specification	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	299	TXT	Simon Richard Andrews	Jan 24, 2023
GSE156006	BS-seq of Tet-TKD 2-cell embryos	Methylation profiling by high throughput sequencing	Mus musculus	21	COV SRA Run Selector	Julia Arand	Nov 22, 2021
GSE112320	Comprehensive analysis of H3K9me2 oocytes, together with DNA methylation and expression analysis of G9a conditional KO oocytes and maternal KO preimplantation embryos	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BEDGRAPH TXT SRA Run Selector	Wan Kin Au Yeung	Apr 02, 2019
GSE252355	Trans-differentiation takes place without reprogramming of developmental-specific DNA methylation, a key determinant of stable cell identity	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	43	BED	Batia Azria	Sep 12, 2024
GSE114587	Identification of epigenetic recovery factor from medicinal-herb seeds (Descurainia sophia) treated asthma based on multi-omics approach	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20		Su-Jin Baek	Dec 26, 2018
GSE129920	BCL6 de-repression induces the fasting transcriptome and protects from steatosis (ChIP-Seq II)	Methylation profiling by high throughput sequencing	Mus musculus	40	TXT SRA Run Selector	Grant D. Barish	Apr 17, 2019
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE157556	Insights into the regulation of the brain-placental axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	42	COV NARROWPEAK	Susanta K. Behura	Aug 27, 2021
GSE183740	Maternal Smchd1 regulates Hox gene expression and patterning in the mouse embryo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Methylation profiling by high throughput sequencing	Mus musculus	179		Natalia Benetti	Jun 27, 2022
GSE203617	Maternal Smchd1 regulates Hox gene expression and patterning in the mouse embryo [ESC RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	8	TXT	Natalia Benetti	Jun 27, 2022
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE134636	Developmental Dieldrin Exposure Alters DNA Methylation at Genes Related to Dopaminergic Neuron Development and Parkinson’s Disease in Mouse Midbrain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	58	COV H5 TXT XLS SRA Run Selector	Alison I Bernstein	Jul 23, 2019
GSE203462	Mechanisms and function of de novo DNA methylation in placental development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus Mus musculus	82	H5	Laura Biggins	Dec 15, 2022