GEO Browser - GEO

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98 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Methylation profiling by high throughput sequencing	Mus musculus
GSE60077	Length-dependent gene misregulation in Rett syndrome	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BW CEL TXT	Harrison Wren Gabel	Mar 12, 2015
GSE102450	Gene expression and DNA methylation profiling in the seminal vesicles (SVs) from neonatal DES-treated mice	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BW CEL CHP	Yin Li	Mar 27, 2018
GSE263121	Foxa-deficiency Restricts Hepatitis B Virus Biosynthesis Through Epigenic Silencing	Expression profiling by array Methylation profiling by high throughput sequencing	Hepatitis B virus Mus musculus	107	RCC	Mark Maienschein-Cline	Jul 16, 2024
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Sus scrofa	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE44935	The Role of Tet1 During Somatic Cell Reprogramming	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	BED TXT SRA Run Selector	Lihui Lin	Mar 08, 2013
GSE72610	Intergenerational consequences of gene-environment induced epigenetic dynamics at rDNA in the mouse	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	137	TXT	Robert Lowe	Jul 08, 2016
GSE75975	Genome-scale DNA methylation oscillations in pluripotent cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	765	COV TXT	Felix Krueger	Jun 25, 2018
GSE76483	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	192	TXT SRA Run Selector	Qin An	Apr 12, 2016
GSE84589	Cis-regulatory landscape of four cell types of the retina	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Adeno-associated virus Mus musculus synthetic construct	64	TAB SRA Run Selector	Dirk Schuebeler	Oct 25, 2017
GSE85731	Epigenetic memory of obesity in mouse colonic epithelium	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	45	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Dec 19, 2017
GSE87749	An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	56		Lars Roed Ingerslev	Feb 22, 2017
GSE89698	A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	189	TXT	Felix Krueger	Nov 01, 2017
GSE93941	MLL2 conveys transcription-independent H3K4me3 in the oocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	86	TXT ZIP SRA Run Selector	Felix Krueger	Jan 01, 2018
GSE109545	A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED COV CSV SRA Run Selector	Myriam Hemberger	May 02, 2018
GSE116208	TET enzymes augment AID expression via 5hmC modifications at the Aicda superenhancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	83	BW	Anjana Rao	Apr 29, 2019
GSE116704	CG dinucleotides enhance promoter activity independent of DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	186	TAB WIG SRA Run Selector	Dirk Schuebeler	Jan 20, 2019
GSE128829	Methyl-CpG binding domain 2 (Mbd2) is an Epigenetic Regulator of Autism-Risk Genes and Cognition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	25	TXT	Moshe Szyf	Jun 22, 2023
GSE131941	Myc is required for adaptive beta cell replication in young mice but is not sufficient in one year old mice fed with a high fat	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	29	TXT SRA Run Selector	Donald K Scott	Sep 29, 2020
GSE135841	Epigenetic priming by Dppa2/4 in pluripotency facilitates multi-lineage commitment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	189	TXT XLSX SRA Run Selector	Steven William Wingett	Jun 23, 2020
GSE137098	Embryonic stem cell-derived neurons as a model system for epigenome maturation during development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Third-party reanalysis	Mus musculus	53	BIGWIG GTF TXT SRA Run Selector	Ryan Lister	Jul 25, 2023