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326 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			WIG
GSE87096	Methylome, hydroxymethylome, and integrative transcriptome profiling in human CRC tissue and paired normal tissues	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	36	XML WIG TXT SRA Run Selector	Yimin Zhu	Dec 31, 2018
GSE61439	Pol-IV dependent transcripts in Arabidopsis	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	42	XLSX WIG TXT PDF SRA Run Selector	Steve Jacobsen	Sep 13, 2015
GSE88867	The DNA modification is dynamic during the conversion from fibroblasts to neurons [Hydroxymethylation]	Methylation profiling by high throughput sequencing	Mus musculus	8	XLSX WIG SRA Run Selector	J Z	Oct 21, 2016
GSE88868	The DNA modification is dynamic during the conversion from fibroblasts to neurons [Methylation]	Methylation profiling by high throughput sequencing	Mus musculus	6	XLSX WIG SRA Run Selector	J Z	Oct 21, 2016
GSE107303	CpG islands shape the epigenome landscape.	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	15	XLSX WIG BW SRA Run Selector	Christophe Papin	Oct 02, 2020
GSE137984	Hippocampal DNA methylation alterations following prenatal ethanol exposure and maternal separation stress in 70 day-old mice	Methylation profiling by high throughput sequencing	Mus musculus	12	XLSX WIG SRA Run Selector	Shiva M Singh	Sep 26, 2019
GSE161331	Cell-free DNA methylome profiling by MBD-seq with ultra-low input	Methylation profiling by high throughput sequencing	Homo sapiens	43	XLSX WIG TXT SRA Run Selector	Jinyong Huang	Jan 01, 2021
GSE162431	RRBS of sorted myeloid cells from tet mutant zebrafish embryos	Methylation profiling by high throughput sequencing	Danio rerio	3	XLSX WIG TXT SRA Run Selector	Kelly Madigan Banks	Dec 02, 2020
GSE70005	Genome-wide gene expression and DNA methylation reveals Genetic and Epigenetic differences in cloned piglets and conventionally bred normal piglets	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Sus scrofa	2	XLS WIG	Changchun Li	Feb 26, 2016
GSE79259	The second subunit of DNA-polymerase delta is required for genomic stability and epigenetic regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	18	XLS WIG TDF BED SRA Run Selector	Jinkui Cheng	Apr 26, 2016
GSE81436	The ortholog of DDM1 is mainly required for CHG and CG methylation of heterochromatin and is involved in DRM2-mediated CHH methylation that targets mostly genic regions of the rice genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Oryza sativa Japonica Group	17	XLS WIG GFF CSV BW BAM SRA Run Selector	chao zhou	Jun 13, 2016
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	WIG BED BAM SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	WIG TAB BED BAM SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE19889	Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa (Illumina)	Methylation profiling by high throughput sequencing	Homo sapiens	7	WIG SRA Run Selector	Antoine Peters	May 16, 2010
GSE19892	Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Homo sapiens	13	WIG PAIR	Antoine Peters	May 16, 2010
GSE22376	Phyloepigenetic comparison of apes	Methylation profiling by high throughput sequencing	Homo sapiens Pan troglodytes Pongo pygmaeus	11	WIG TXT SRA Run Selector	Dario Boffelli	Sep 09, 2011
GSE25246	BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS	Methylation profiling by high throughput sequencing	Homo sapiens	10	WIG SRA Run Selector	BROAD INSTITUTE	Nov 11, 2010
GSE25247	BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in human subject	Methylation profiling by high throughput sequencing	Homo sapiens	55	WIG SRA Run Selector	BROAD INSTITUTE	Nov 11, 2010
GSE25248	BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in HUES lines	Methylation profiling by high throughput sequencing	Homo sapiens	11	WIG SRA Run Selector	BROAD INSTITUTE	Nov 11, 2010
GSE26100	Widespread targeted chromatin remodeling during the initial phase of somatic cell reprogramming	Expression profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	36	WIG TXT CEL	Richard Koche	Jan 03, 2011