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694 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			TSV
GSE226467	5-formylcytosine is an activating epigenetic mark for RNA Pol III during zygotic reprogramming	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Xenopus tropicalis	32	BW TSV	Emil Karaulanov	Aug 29, 2024
GSE264488	Chemotherapy promotes antigen presentation in monocytes of patients with high-grade serous ovarian carcinoma [RRBS]	Methylation profiling by high throughput sequencing	Homo sapiens	14	COV TSV	Irina Larionova	Jul 31, 2024
GSE239408	Maternal adipose tissue DNA methylation and gene expression associated with excessive gestational weight gain	Methylation profiling by high throughput sequencing	Homo sapiens	24	BED TSV	Mark D Ziemann	Jul 26, 2024
GSE233099	STAT3 inhibition permits epigenetic reprogramming and TLR9/IRF8-driven differentiation of inv(16) acute myeloid leukemia.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	41	MTX TSV TXT	Haiqing Li	Jul 23, 2024
GSE249241	DNA methylation enables recurrent endogenisation of giant viruses in an animal relative	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amoebidium appalachense Amoebidium parasiticum Creolimax fragrantissima Ichthyosporea sp. XGB-2017a Sphaeroforma arctica	50	CGMAP TSV TXT	Alex de Mendoza	Jul 15, 2024
GSE236728	Synthetic essentiality of thymine DNA glycosylase in p53-deficient cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	65	BEDGRAPH BW MTX NARROWPEAK TSV	Zhenyu Shao	Jun 19, 2024
GSE261191	Epigenetic priming induces cancer testis antigens and human endogenous retroviruses in glioma for enhanced T cell responses at single cell resolution	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	44	IDAT MTX TSV	Thomas Jasper Lai	Jun 03, 2024
GSE259312	Cell-free DNA Methylation Patterns in Aging and Their Association with Inflamm-aging	Methylation profiling by high throughput sequencing	Homo sapiens	35	TSV	Sijia Li	May 23, 2024
GSE252913	Dynamic evolution of the heterochromatin sensing histone demethylase IBM1	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana Boechera stricta Isatis lusitanica Raphanus raphanistrum	13	TSV	Robert J Schmitz	May 10, 2024
GSE224850	H1FOO-DD promotes efficiency and uniformity in reprogramming to naive pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	168	BED IDAT MTX TSV TXT	Akira Kunitomi	May 01, 2024
GSE260933	Mutant IDH inhibitors induce lineage differentiation in IDH-mutant Oligodendroglioma II	Methylation profiling by high throughput sequencing	Mus musculus	141	TSV	Masashi Nomura	May 01, 2024
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE232078	In vitro reconstitution of epigenetic reprogramming in the human germ line	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	119	MTX TSV TXT	Yukihiro Yabuta	Apr 24, 2024
GSE245738	SAC-seq for transcriptome-wide quantitative sequencing of mRNA m6A at base resolution in Arabidopsis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	44	TSV	CHUAN HE	Apr 19, 2024
GSE262845	Antitumor progenitor exhausted CD8 T cells are sustained with TCR engagement	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BW MTX TSV TXT	Tian Mi	Apr 05, 2024
GSE262259	Single cell methylation, RNA, and ATAC sequencing of amygdala brain tissue from inbred mouse strains	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	24	TSV	Patrick Chen	Apr 04, 2024
GSE262482	DNA methylation status determines the sensitivity of repeats to restriction by the HUSH-MORC2 complex [ONT whole genome DNA]	Methylation profiling by high throughput sequencing	Homo sapiens	2	TSV	Ninoslav Pandiloski	Mar 26, 2024
GSE260848	Comparison of CcrM-dependent methylation in Caulobacter crescentus and Brucella abortus by nanopore sequencing	Methylation profiling by high throughput sequencing	Brucella abortus 2308 Caulobacter vibrioides NA1000	10	TSV	Maxwell B Campbell	Mar 11, 2024
GSE240481	Characterisation and reproducibility of the HumanMethylationEPIC v2.0 BeadChip for DNA methylation profiling [WGBS]	Methylation profiling by high throughput sequencing	Homo sapiens	6	TSV	Timothy John Peters	Mar 07, 2024
GSE213336	Basal cell extrusion primes pluripotent cells for differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BW TAR TSV	Helene Kretzmer	Mar 06, 2024