GEO Browser - GEO

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58 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			TAR
GSE97179	Single Cell Methylome Signatures Reveal Distinct Neuronal Populations and Regulatory Elements in the Mammalian Cortex	Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	6172	TAR SRA Run Selector	Joseph R Ecker	Aug 10, 2017
GSE83534	Epigenomics Studies in Acute Myeloid Leukemia disease progression	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	427	TAR	Francine E. Garrett-Bakelman	Jun 21, 2016
GSE83532	Epigenomics Studies in Acute Myeloid Leukemia disease progression [enhanced RRBS-seq]	Methylation profiling by high throughput sequencing	Homo sapiens	293	TAR	Francine E. Garrett-Bakelman	Jun 21, 2016
GSE225173	Predicting age in single cells and low coverage DNA methylation data	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	250	COV TAR	Laura Biggins	Jun 03, 2024
GSE168455	Parallel tracking dosage compensation in the early mouse embryo	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Mus musculus castaneus	235	TAR TXT SRA Run Selector	Chunyao Wei	Mar 15, 2024
GSE242067	Genome access is transcription factor specific and defined by nucleosome position	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BW TAR TXT	Dirk Schuebeler	Aug 13, 2024
GSE242066	Genome access is transcription factor specific and defined by nucleosome position [NOMe-seq]	Methylation profiling by high throughput sequencing	Mus musculus	115	FASTA TAR TXT	Dirk Schuebeler	Aug 13, 2024
GSE247678	Single-cell multi-omics sequencing revealed cytoskeleton defects led to human embryonic arrest characterized with zygotic genome activation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	111	TAR TXT	Teng Wang	Nov 17, 2023
GSE159297	Transient naive reprogramming corrects hiPS cells functionally and epigenetically	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	110	BIGWIG CGMAP H5 TAR	Ryan Lister	Aug 11, 2023
GSE130140	Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens	92	BED BW COV MATRIX NARROWPEAK SF TAR TXT SRA Run Selector	Zhenjia Wang	Aug 19, 2020
GSE130306	DNMT1 drives 4D genome rewiring during oncogene induced senescence	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens	92	BED BW TAR TXT SRA Run Selector	Satish Sati	Mar 27, 2020
GSE172526	Postnatal expansion of the lymph node stromal cell pool towards reticular and CD34+ stromal cell subsets	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	86	BW TAR	Joern Pezoldt	Oct 07, 2022
GSE188968	Geminiviruses employ host DNA glycosylases to subvert DNA methylation-mediated defense	Methylation profiling by high throughput sequencing	Arabidopsis thaliana Nicotiana benthamiana	69	TAR SRA Run Selector	Yijun Qi	Dec 20, 2021
GSE157720	YY1 safeguard multidimensional epigenetic landscape associated with extended pluripotency	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	63	BW TAR TXT SRA Run Selector	xiaotao dong	Apr 18, 2022
GSE95740	Environmental enrichment increases transcriptional and epigenetic differentiation between mouse dorsal and ventral dentate gyrus neurons	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	60	TAR TXT SRA Run Selector	Eran A Mukamel	Jan 19, 2018
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE161570	KMT2C Loss Promotes Small Cell Lung Cancer Metastasis through DNMT3A-mediated Epigenetic Reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	55	BED BW CGMAP CSV GAPPEDPEAK TAR XLSX SRA Run Selector	Xaingyu Pan	Feb 23, 2022
GSE67615	DNA methylation in the placentas of typically developing and autistic children	Methylation profiling by high throughput sequencing	Homo sapiens	51	TAR SRA Run Selector	Janine LaSalle	Apr 05, 2018
GSE154521	Temporal Analyses of Cardiac Chromatin Accessibility, DNA Methylation and Epigenomic Structure Reveal Locus-Specific Regulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	47	BW CGMAP TAR	Tom Vondriska	Dec 01, 2021
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BW MTX NARROWPEAK TAR TSV TXT SRA Run Selector	Mark F Sabbagh	Sep 06, 2018