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49 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			SRA Run Selector	Felix Krueger
GSE42923	FGF Signaling Inhibition in ESCs Drives Rapid Genome-wide Demethylation to the Epigenetic Ground State of Pluripotency	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Felix Krueger	Jun 27, 2013
GSE55475	Detailed analysis of the genetic and epigenetic signature of iPS cell-derived mesodiencephalic dopaminergic neurons	Methylation profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Felix Krueger	Mar 01, 2014
GSE56879	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylation profiling by high throughput sequencing	Mus musculus	56	TXT ZIP SRA Run Selector	Felix Krueger	Jul 18, 2014
GSE59525	Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Dinoponera quadriceps Polistes canadensis	37	TXT SRA Run Selector	Felix Krueger	Sep 30, 2015
GSE60945	Resetting Transcription Factor Control Circuitry Towards Ground State Pluripotency In Human	Methylation profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Felix Krueger	Sep 10, 2014
GSE62138	Epigenetic memory of the first cell fate decision prevents complete ES cell reprogramming into trophoblast [MeDIP-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	9	TXT SRA Run Selector	Felix Krueger	Nov 24, 2014
GSE63417	Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation	Methylation profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Felix Krueger	Dec 22, 2014
GSE66049	Maternal DNA methylation regulates early trophoblast development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	29	TXT SRA Run Selector	Felix Krueger	Jan 07, 2016
GSE68642	Parallel single-cell bisulfite- and RNA-sequencing link transcriptional and epigenetic heterogeneity [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	96	TXT SRA Run Selector	Felix Krueger	Dec 24, 2015
GSE69823	Gender Differences in Global but not Targeted Demethylation in iPSC Reprogramming	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	203	COV TXT SRA Run Selector	Felix Krueger	Jan 27, 2017
GSE75751	Chromatin decompaction coupled MuERVL endogenous retrovirus activation induces genome-wide DNA demethylation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	TXT SRA Run Selector	Felix Krueger	Oct 01, 2016
GSE75973	DNA methylation oscillations at CpG poor enhancers in primed embryonic stem cells [PBAT Bisfulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	42	TXT SRA Run Selector	Felix Krueger	Jun 26, 2018
GSE75974	DNA methylation oscillations at CpG poor enhancers in primed embryonic stem cells [single cell Bisulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	96	TXT SRA Run Selector	Felix Krueger	Jun 26, 2018
GSE77420	Molecular mechanisms of global DNA demethylation to naïve pluripotency in ESC	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	80	TXT SRA Run Selector	Felix Krueger	May 26, 2016
GSE86903	Comparative principles of DNA methylation reprogramming during human and mouse in vitro primordial germ cell specification [Mouse and Human RNA-seq and BS-seq]	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	46	TXT SRA Run Selector	Felix Krueger	Oct 10, 2016
GSE89697	A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells [BS-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	18	TXT SRA Run Selector	Felix Krueger	Nov 01, 2017
GSE90168	Epigenetic resetting of human pluripotency	Methylation profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Felix Krueger	Aug 01, 2017
GSE92273	Tracking the embryonic stem cell transition from ground state pluripotency	Methylation profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Felix Krueger	Feb 21, 2017
GSE93941	MLL2 conveys transcription-independent H3K4me3 in the oocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	86	TXT ZIP SRA Run Selector	Felix Krueger	Jan 01, 2018
GSE93957	Multi-tissue DNA methylation age predictor in mouse	Methylation profiling by high throughput sequencing	Mus musculus	62	TXT SRA Run Selector	Felix Krueger	Mar 28, 2017