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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing				RDS
GSE197501	Combinatorial quantification of 5mC and 5hmC at individual CpG dyads and the transcriptome in single cells reveals modulators of DNA methylation maintenance fidelity	Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus synthetic construct	52		XLSX TXT TSV RDS MTX CSV	Alex Chialastri	Aug 07, 2023
GSE150527	Comprehensive epigenomic profiling of human alveolar epithelial differentiation identifies key epigenetic states and transcription factor co-regulatory networks for maintenance of distal lung identity	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	48		WIG TAB RDS BW BIGWIG SRA Run Selector	Crystal N Marconett	Oct 27, 2021
GSE117565	Fucntional genetic variants mediate their regulatory effects through altered transcription factor binding. [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Homo sapiens	17		TXT RDS SRA Run Selector	Andrew Johnston	Jun 04, 2019
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71		TXT RDS CSV COV BW BEDGRAPH SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244		TXT TSV RDS RDATA BW BEDPE BED SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118		TXT TSV RDS RDATA BW BED SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171		TXT TSV RDS RDATA BW BED SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150		TXT TSV RDS NARROWPEAK MTX BW BIGWIG	Bernard Klaas van der Veer	Apr 12, 2023
GSE240863	Single cell discovery of m6A RNA modifications in the hippocampus	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	43		TXT RDS CSV BED	Magdalena Justyna Koziol	May 07, 2024
GSE207337	Differentiation-related epigenomic changes define clinically distinct keratinocyte cancer subclasses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8		TSV TBI RDS H5 CSV BED	Llorenç Solé Boldo	Aug 29, 2022
GSE224563	DNA methylation in the mouse cochlea promotes maturation of supporting cells and contributes to the failure of hair cell regeneration	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52		TSV RDS MTX H5SEURAT H5 COV BW BED	John Duc Nguyen	Feb 07, 2023
GSE175576	Dynamics of parental genomic imprinting during human male germ cell development	Methylation profiling by high throughput sequencing	Homo sapiens	25		SRA Run Selector RDS CSV	Robin Struijk	Jun 26, 2021
GSE221201	Methylation state of latent and proliferative metastatic tumor cells	Methylation profiling by high throughput sequencing	Mus musculus	8		RDS	Moritz Jakab	Oct 02, 2023
GSE232450	Dissecting the sequence and structural determinants guiding m6A deposition and evolution via inter- and intra-species hybrids	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus Saccharomyces cerevisiae Saccharomyces cerevisiae x Saccharomyces paradoxus Saccharomyces paradoxus	144		RDS	Ran Shachar	Jan 24, 2024
GSE249661	guidedNOMe-seq quantifies chromatin states at single allele resolution for hundreds of custom regions in parallel [guidedNOMe-seq]	Other Methylation profiling by high throughput sequencing	Mus musculus	40		RDS	Fabio Mohn	Jul 10, 2024
GSE272699	sciMET-ATAC for simultaneous single-cell DNA methylation and chromatin accessibility analysis	Methylation profiling by high throughput sequencing	Homo sapiens	1		RDS H5 BED	Andrew Adey	Aug 30, 2024
GSE273157	Early Moderate Prenatal Alcohol Exposure and Maternal Diet Impact Offspring DNA Methylation Across Species	Methylation profiling by high throughput sequencing	Mus musculus	32		RDS	Nikki Schultz	Jul 30, 2024
GSE276548	DNA methylome sequencing of aged vs young AT2 cells	Methylation profiling by high throughput sequencing	Mus musculus	44		RDS BW	Yingqian Ada Zhan	Nov 12, 2024