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125 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			NARROWPEAK
GSE86376	A new axis linking diabetes to cancer: Glucose regulates tumor suppressor TET2 and 5hmC through AMPK	Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	12	BEDGRAPH CEL NARROWPEAK	Di Wu	Jul 15, 2018
GSE117383	SIRT1 Activation Disrupts Maintenance of Myelodysplastic Syndrome Stem and Progenitor Cells by Restoring TET2 Function	Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	16	BEDGRAPH NARROWPEAK TXT	Sun Jie	Aug 13, 2018
GSE61971	Molecular profiling of mouse Dnmt3a/FLT3-ITD leukemia models	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT	Margaret Goodell	May 19, 2016
GSE63287	Kdm5b depletion in embryonic stem cells does not induce intragenic promoters or affect transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BEDGRAPH NARROWPEAK TXT	Andrew Johnston	Mar 21, 2020
GSE77845	TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	7	NARROWPEAK	Viviana Piccolo	May 04, 2016
GSE104988	KDM5B links cellular transcriptome heterogeneity to therapy resistance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	333	BED BROADPEAK BW NARROWPEAK TSV TXT	Kornelia Polyak	Oct 03, 2018
GSE106614	Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA binding factor Rbm15/Spenito to other components of the m6A machinery	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	27	BW NARROWPEAK TSV	Jean-Yves Roignant	Dec 04, 2018
GSE111700	Loss of TET2 results in DNA methylation changes in mouse GC B-cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	28	NARROWPEAK TXT	Sheng Li	Oct 08, 2018
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	BW MTX NARROWPEAK TAR TSV TXT SRA Run Selector	Mark F Sabbagh	Sep 06, 2018
GSE112027	HPV	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	181	BED NARROWPEAK	Elana Judith Fertig	Mar 20, 2018
GSE112658	Comprehensive Epigenetic Landscape of Rheumatoid Arthritis Fibroblast-like Synoviocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	213	BED BROADPEAK NARROWPEAK TSV	Gary S Firestein	Apr 30, 2018
GSE116581	fruitENCODE: An encyclopedia of DNA elements for fruit ripening	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana Carica papaya Citrullus lanatus Cucumis melo Cucumis sativus Fragaria vesca Malus domestica Musa acuminata AAA Group Oryza sativa Prunus persica Pyrus x bretschneideri Solanum lycopersicum Vitis vinifera	282	BW NARROWPEAK TBI TXT SRA Run Selector	Silin Zhong	Jul 04, 2018
GSE117732	A novel role for the conserved, orphan deaminase APOBEC2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	56	BED BW NARROWPEAK TXT WIG	Nina Papavasiliou	Jul 26, 2021
GSE118093	N6-methyladenine DNA Modification in Glioblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens	50	BED BIGWIG BW NARROWPEAK TDF TXT	Jeremy Rich	Nov 01, 2018
GSE119077	Epigenetic safeguards are coordinately removed to reverse cell identity	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	32	NARROWPEAK TXT	Rupa Sridharan	Sep 26, 2019
GSE124427	A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Daphnia pulex	31	FA GFF NARROWPEAK TXT SRA Run Selector	Jouni Antero Kvist	Oct 18, 2019
GSE126227	N6-methyladenine in DNA antagonizes SATB1 in early development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	55	BED BW NARROWPEAK TXT	Andrew Zhuo Xiao	Jul 15, 2020
GSE127986	NRP histone chaperones promote the removal of histone variant H2A.Z	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	54	BROADPEAK BW NARROWPEAK TXT WIG SRA Run Selector	Zhenhui Zhong	Apr 29, 2020
GSE128269	A Unique Epigenomic Landscape Defines Human Erythropoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	49	BW NARROWPEAK TXT	Vince Schulz	Sep 11, 2019
GSE129673	EpiMethylTag simultaneously detects ATAC-seq or ChIP-seq signals with DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	26	BED BEDGRAPH BW COV NARROWPEAK TSV TXT SRA Run Selector	Priscillia Lhoumaud	Oct 01, 2019