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96 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			CEL
GSE10877	Highly integrated single base resolution maps of the epigenome in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Methylation profiling by array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	CEL TXT	Joseph R Ecker	Apr 21, 2008
GSE21673	Relationship between nucleosome positioning and DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana Homo sapiens	6	CEL TXT	matteo Pellegrini	May 29, 2010
GSE36846	Selection of epigenetic variation in Arabidopsis	Methylation profiling by high throughput sequencing Expression profiling by array Genome variation profiling by high throughput sequencing	Arabidopsis thaliana	33	CEL TXT	Christian Heichinger	Sep 01, 2014
GSE52952	miRNAs trigger widespread epigenetically-activated siRNAs from transposons in Arabidopsis	Expression profiling by array Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	26	CEL TXT	Kate M Creasey	Mar 18, 2014
GSE89592	DNA sequence properties that determine susceptibility to epiallelic switching	Expression profiling by genome tiling array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	22	CEL TXT	Marco Catoni	Jan 09, 2017
GSE119363	Expression and methylation data from seedlings of two light grown Arabidopsis thaliana CSN mutants and two wild type ecotypes.	Expression profiling by array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	18	CEL	Tamir Tuller	Jul 28, 2020
GSE129249	Topoisomerase VI participates to a chromatin barrier-like function that prevents heterochromatin spreading in euchromatic islands	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	34	BIGWIG BW CEL	Christophe Laloi	Apr 03, 2019
GSE48527	DNA methylation and gene expression analysis of an Epithelial-to-mesenchymal transition model	Expression profiling by array Methylation profiling by high throughput sequencing	Canis lupus familiaris	8	CEL TXT	Manel Esteller	Aug 14, 2014
GSE11839	Differentiation associated changes in gene expression profiles for interstitial cystitis and control urothelial cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	12	CEL PDF	Deborah Erickson	Sep 05, 2008
GSE24546	Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias and copy number variation	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Genome variation profiling by SNP array	Homo sapiens	40	CEL MAP TXT SRA Run Selector	Mark Robinson	Oct 08, 2010
GSE31355	A genome wide methylation map of neuroblastoma cell lines	Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL WIG	Maté Ongenaert	Sep 13, 2012
GSE32188	5-hydroxymethylcytosine-mediated epigenetic dynamics during neurodevelopment and aging	Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus Rattus norvegicus	30	CEL	Keith E Szulwach	Oct 30, 2011
GSE32260	Relationship between DNMT1-RNA interactions, DNA methylation and gene expression	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	8	BSP CEL GTF WIG	Touati Benoukraf	Dec 01, 2012
GSE33231	Genome wide DNA methylation analysis of leukemia and reprogrammed leukemia cells	Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	16	CEL	Touati Benoukraf	Oct 01, 2012
GSE38938	Linking DNA Methyltransferases (DNMTs) to Epigenetic Marks and Nucleosome Structure Genome-Wide in Human Tumor Cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	28	BED CEL	Keith robertson	Oct 19, 2012
GSE40167	5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	795	BED CEL	Shraddha Pai	Aug 24, 2012
GSE41050	Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	35	BW CEL	Gilad Landan	Sep 24, 2012
GSE44039	TET1 is a maintenance DNA demethylase that prevents methylation spreading in adult cells	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens	25	CEL TXT	CHUNLEI JIN	Jun 04, 2014
GSE44390	DNA Methyltransferase inhibition reverses epigenetically embedded phenotypes in lung cancer preferentially affecting Polycomb target genes	Expression profiling by array Methylation profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	37	CEL TXT	Christian Rohde	Dec 18, 2013
GSE45342	Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	31	BAR CEL TXT	Scott J. Diede	Oct 10, 2013