GEO Browser - GEO

Series

Samples

Platforms

DataSets

342 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			BIGWIG
GSE103924	Topoisomerase VI participates to a chromatin barrier-like function that prevents heterochromatin spreading in euchromatic islands (HTS)	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	28	BIGWIG BW XLSX SRA Run Selector	Christophe Laloi	Sep 12, 2018
GSE111830	DNA methylation prevents REF6 binding in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	15	BIGWIG SRA Run Selector	Xiaofeng Cao	May 01, 2019
GSE129249	Topoisomerase VI participates to a chromatin barrier-like function that prevents heterochromatin spreading in euchromatic islands	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	34	BIGWIG BW CEL	Christophe Laloi	Apr 03, 2019
GSE144181	Aphid feeding induces the relaxation of epigenetic control and the associated regulation of the defense response in Arabidopsis	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Arabidopsis thaliana	14	BEDGRAPH BIGWIG TXT SRA Run Selector	German Martinez	Feb 02, 2021
GSE173190	Bisulfte sequnencing of Wild Type (Col-0), and miP1aOX in Arabidopsis thaliana	Methylation profiling by high throughput sequencing	Arabidopsis thaliana	2	BIGWIG CSV SRA Run Selector	Bin Sun	Apr 24, 2021
GSE173192	Bisulfte sequnencing and DNA-seq of miP1aOX in Arabidopsis thaliana	Methylation profiling by high throughput sequencing Other	Arabidopsis thaliana	8	BIGWIG	Bin Sun	Apr 24, 2021
GSE241969	Genome-wide distribution of 5-hydroxymethyluracil and chromatin accessibility in the Breviolum minutum genome	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Bigelowiella natans Breviolum minutum Candida albicans Homo sapiens Saccharomyces cerevisiae	34	BEDGRAPH BIGWIG	Georgi Kolev Marinov	Oct 19, 2023
GSE126703	Regenerating zebrafish fin epigenome is characterized by stable lineage-specific DNA methylation and dynamic chromatin accessibility	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Danio rerio	44	BIGWIG TXT	Hyung Joo Lee	Jan 20, 2020
GSE178691	Identification of transcription termination defects at DNA hypomethylated transcription termination sites in DNA methyltransferase 3a-deficient vertebrates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Danio rerio	4	BEDGRAPH BIGWIG	Yutaka Kikuchi	Jun 14, 2022
GSE184893	RNA m6A methylome from zebrafish zygotes, mouse liver polyA-selected RNAs, mouse embryonic stem cells, spike-in RNA controls, and single mouse oocytes and embryos	Methylation profiling by high throughput sequencing	Danio rerio Mus musculus	52	BIGWIG SRA Run Selector	Kin Fai Au	May 05, 2023
GSE186506	H3K36 Dimethylation Shapes the Epigenetic Interaction Landscape by Directing Repressive Chromatin Modifications in Embryonic Stem Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	28	BIGWIG BW TDF SRA Run Selector	Kieran Campbell	Mar 28, 2022
GSE188754	A nutrient information pathway links diet to taste (DNA-Seq I)	Methylation profiling by high throughput sequencing	Drosophila melanogaster	10	BIGWIG SRA Run Selector	Monica Dus	Mar 21, 2023
GSE188755	A nutrient information pathway links diet to taste (DNA-Seq II)	Methylation profiling by high throughput sequencing	Drosophila melanogaster	10	BIGWIG SRA Run Selector	Monica Dus	Mar 21, 2023
GSE188757	Nutrigenomic regulation of sensory plasticity	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster	26	BIGWIG TXT	Monica Dus	Mar 20, 2023
GSE48580	Genome-wide methylation maps for Proliferating and Senescent cells	Methylation profiling by high throughput sequencing	Homo sapiens	9	BED BIGWIG TXT SRA Run Selector	Peter D. Adams	Nov 25, 2013
GSE51902	Control of 5mC and 5hmC by TET dioxygenases in human embryonic carcinoma cells [MBD-Seq]	Methylation profiling by high throughput sequencing	Homo sapiens	14	BED BIGWIG TXT SRA Run Selector	Keith D Robertson	Jun 14, 2014
GSE51903	Control of 5mC and 5hmC by TET dioxygenases in human embryonic carcinoma cells	Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	22	BED BIGWIG CEL TXT	Keith D Robertson	Jun 14, 2014
GSE54842	Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome [MBD-seq]	Methylation profiling by high throughput sequencing	Homo sapiens	3	BED BIGWIG TXT SRA Run Selector	Keith D Robertson	Oct 20, 2014
GSE54843	Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	56	BED BIGWIG CEL TXT	Keith D Robertson	Oct 20, 2014
GSE55124	Genome-wide methylation maps for untreated and Aza treated AML3 cells	Methylation profiling by high throughput sequencing	Homo sapiens	4	BIGWIG TXT SRA Run Selector	Peter Adams	Jul 01, 2014