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469 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing			BEDGRAPH
GSE14570	Extensive demethylation of repetitive elements during seed development underlies gene imprinting	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	10	BEDGRAPH GFF PAIR TXT SRA Run Selector	Jorja Henikoff	Jun 12, 2009
GSE19786	Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH SRA Run Selector	Adrian P Bird	Mar 04, 2010
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE21442	Comprehensive analysis of orphan CpG islands identifes novel promoters with conserved DNA methylation dynamics	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BEDGRAPH SRA Run Selector	Adrian P Bird	Oct 05, 2010
GSE25688	Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System (MAP-Seq and ChIP-Seq data)	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH SRA Run Selector	Adrian Bird	May 23, 2011
GSE25689	Cell Type-Specific DNA Methylation at Intragenic CpG Islands in the Immune System	Expression profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BEDGRAPH	Adrian Bird	May 23, 2011
GSE25899	Paternally-induced transgenerational environmental reprogramming of metabolic gene expression in mammals	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by array	Mus musculus	42	BEDGRAPH CEL GPR TXT	naomi habib	Jan 14, 2011
GSE30340	Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates	Methylation profiling by high throughput sequencing	Homo sapiens Pan troglodytes	4	BED BEDGRAPH SRA Run Selector	Andrew D Smith	Sep 01, 2011
GSE31204	Epigenetic remodeling and deregulation of SAPAP4/DLGAP4 is linked with early-onset cerebellar ataxia	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	BED BEDGRAPH WIG SRA Run Selector	Sheroy Minocherhomji	Jul 01, 2014
GSE31577	Genome-wide analysis of global and caste-specific DNA methylation in two ant species: Camponotus floridanus and Harpegnathos saltator	Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Camponotus floridanus Harpegnathos saltator	47	BEDGRAPH FA	Hong zhi Cao	Aug 09, 2012
GSE31971	Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment	Methylation profiling by high throughput sequencing	Homo sapiens	4	BED BEDGRAPH SRA Run Selector	Andrew D Smith	Sep 15, 2011
GSE34612	5-hydroxymethylcytosine is linked with expression of brain-specific protein-coding genes but not brain-specific microRNA host genes [hMeDIP-Seq]	Methylation profiling by high throughput sequencing	Homo sapiens	5	BEDGRAPH SRA Run Selector	Sheroy Minocherhomji	Sep 01, 2015
GSE35238	5-hydroxymethylcytosine is linked with expression of brain-specific protein-coding genes but not brain-specific microRNA host genes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	6	BED BEDGRAPH	Sheroy Minocherhomji	Sep 01, 2015
GSE35854	Maternal Influence on Exonic CpG Island Methylation in the Developing Hippocampus [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Miklos Toth	Feb 04, 2013
GSE35856	Maternal Influence on Exonic CpG Island Methylation in the Developing Hippocampus	Expression profiling by high throughput sequencing Methylation profiling by array Methylation profiling by high throughput sequencing	Mus musculus	29	BEDGRAPH PAIR WIG	Miklos Toth	Feb 04, 2013
GSE38651	Dnmt3a protects active chromosome domains against cancer-associated hypomethylation	Methylation profiling by high throughput sequencing	Mus musculus	5	BEDGRAPH SRA Run Selector	Guenter Raddatz	Jan 22, 2013
GSE39996	Dnmt2-dependent methylomes lack biologically relevant DNA methylation patterns [Drosophila melanogaster]	Methylation profiling by high throughput sequencing	Drosophila melanogaster	2	BEDGRAPH SRA Run Selector	Guenter Raddatz	May 06, 2013
GSE39997	Dnmt2-dependent methylomes lack biologically relevant DNA methylation patterns [Schistosoma mansoni]	Methylation profiling by high throughput sequencing	Schistosoma mansoni	1	BEDGRAPH SRA Run Selector	Guenter Raddatz	May 06, 2013
GSE40251	High-fat or ethinyl-estradiol intake during pregnancy increases mammary cancer risk in several generations of offspring	Methylation profiling by high throughput sequencing	Rattus norvegicus	6	BEDGRAPH SRA Run Selector	Ye Tian	Sep 20, 2012
GSE41214	Genome-scale methylome analysis of the desert locust, Schistocerca gregaria	Methylation profiling by high throughput sequencing	Schistocerca gregaria	2	BEDGRAPH SRA Run Selector	Guenter Raddatz	May 03, 2013