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266 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			SRA Run Selector
GSE98101	Spatial-temporal epigenetic landscape of mouse gastrula	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	120	BW TAGALIGN TXT XLS SRA Run Selector	Naihe Jing	Oct 07, 2019
GSE118785	H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	43	BW TDF SRA Run Selector	Carmen Rivas	Aug 30, 2019
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE126958	Genome-wide methyl-cytosine competition by DNMT and TET	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	42	BED TXT SRA Run Selector	Jocelyn Charlton	Apr 21, 2020
GSE128480	Downregulation of Uhrf1 activity by TGF-β signaling controls Foxp3 methylation and iTreg cell differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	TXT SRA Run Selector	Xiang Sun	Sep 08, 2019
GSE129037	Uncoupling histone H3K4 trimethylation from developmental gene expression via an epigenetic equilibrium of Polycomb, COMPASS and DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	128	BW COV TXT SRA Run Selector	Ali Shilatifard	Mar 17, 2020
GSE130735	Genome-wide roles of DNA methyltransferases in mouse embryos	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	65	BW IGV TDF SRA Run Selector	Michael Weber	May 20, 2020
GSE132952	Methylation and gene expression data from Dnmt3b+/+, Dnmt3b-/- and Dnmt3bCI/CI embryos harvested at E11.5	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	18	BIGWIG TXT SRA Run Selector	Rene Opavsky	Aug 19, 2019
GSE134636	Developmental Dieldrin Exposure Alters DNA Methylation at Genes Related to Dopaminergic Neuron Development and Parkinson’s Disease in Mouse Midbrain	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	58	COV H5 TXT XLS SRA Run Selector	Alison I Bernstein	Jul 23, 2019
GSE136417	Maternal exposure to a mitochondrial toxicant results in life-long alterations in DNA methylation and gene expression in the offspring	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	66	BIGWIG TXT SRA Run Selector	Janine Santos	Jul 31, 2020
GSE137098	Embryonic stem cell-derived neurons as a model system for epigenome maturation during development	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Third-party reanalysis	Mus musculus	53	BIGWIG GTF TXT SRA Run Selector	Ryan Lister	Jul 25, 2023
GSE137337	Epigenetic regulator function through mouse gastrulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	54	BW MTX TSV SRA Run Selector	Helene Kretzmer	Apr 07, 2020
GSE139413	EED is required for Mouse Primordial Germ Cell Differentiation in the Embryonic Gonad	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	222	CGMAP TXT SRA Run Selector	Pao-Yang Chen	May 11, 2022
GSE140125	DeepH&M: Simultaneous determination of single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	24	COV TXT SRA Run Selector	Daofeng Li	Sep 10, 2020
GSE141587	Transcriptomic and epigenetic disruptions in excitatory neurons in Dnmt3a conditional knockout mouse	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	49	BED BW TSV TXT SRA Run Selector	Joseph R Ecker	May 23, 2022
GSE146797	WGBS and RNA-seq of mouse livers and human Hep3B cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	12	TXT SRA Run Selector	Yi Wu	Apr 07, 2020
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE154270	Methylation and gene expression data obtained from Dnmt3b+/- peripheral T-cell lymphomas.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BIGWIG TXT SRA Run Selector	Rene Opavsky	Dec 31, 2020
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021