GEO Browser - GEO

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113 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			BW
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE147568	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	101	BW TXT	Daniel Holoch	Aug 19, 2021
GSE169535	A cis-acting mechanism mediates trancriptional memory at Polycomb target genes in mammals [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Daniel Holoch	Aug 19, 2021
GSE224077	A genetic screen identifies BEND3 as a regulator of bivalent gene expression and global DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BW	Pierre-Antoine Defossez	Aug 26, 2023
GSE185708	A hyper-quiescent chromatin state is a barrier to productive regeneration during aging.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	256	BW TXT	Supriyo De	Mar 17, 2023
GSE199890	Analysis of de novo methylation in mouse embryonic stem cells mediated by Dnmt3a2 PWWP domain variants	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	14	BW	Brian Liau	Sep 05, 2022
GSE262845	Antitumor progenitor exhausted CD8 T cells are sustained with TCR engagement	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	BW MTX TSV TXT	Tian Mi	Apr 05, 2024
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE212029	B16 and 4T1 cell lines with decitabine treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	36	BW NARROWPEAK	Eric Greer	Jun 30, 2024
GSE213336	Basal cell extrusion primes pluripotent cells for differentiation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BW TAR TSV	Helene Kretzmer	Mar 06, 2024
GSE242724	Base-resolution m5C profiling across the mammalian transcriptome by bisulfite-free enzyme-assisted chemical labeling approach	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	104	BW CSV TXT XLS	Xiaoyu Li	Jul 11, 2024
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE212007	CDCA7-associated global aberrant DNA hypomethylation translates to localized, tissue-specific transcriptional responses	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	36	BW MTX TSV	Lucia Daxinger	Feb 09, 2024
GSE268886	CXXC5 stabilizes DNA methylation patterns in mouse embryonic stem cells [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	4	BW	Gerd P. Pfeifer	Jun 04, 2024
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE247019	Cancer-associated DNA Hypermethylation of Polycomb Targets Requires DNMT3A Dual Recognition of histone H2AK119 Ubiquitination and the Nucleosome Acidic Patch	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	134	BW COV	Kristjan H. Gretarsson	Aug 28, 2024
GSE237800	Catalytic dependent and independent roles of Tet3 in activation of ectodermal and silencing of mesodermal programs during neuroectoderm specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	35	BW CSV	Meelad M Dawlaty	Apr 02, 2024
GSE124540	ChIP-seq and RNA-seq analysis of histone Kcr in the embryonic forebrain and neural stem/progenitor cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BED BW TXT SRA Run Selector	Dai Shang Kun	Jun 22, 2021
GSE249430	Cohesin trajectories shape the epigenetic and transcriptional landscape of clustered Protocadherin genes for single neuron identities	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	80	BEDGRAPH BW H5 HIC	Lea Kiefer	Jul 29, 2024
GSE227977	Comparative analysis of Tet2 catalytic deficient and knockout bone marrow over time	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	30	BW CSV	Meelad M Dawlaty	Jun 01, 2023