GEO Browser - GEO

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46 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Methylation profiling by high throughput sequencing			BEDGRAPH
GSE130119	MAFG-driven astrocytes promote CNS inflammation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	163	BEDGRAPH CSV TXT	Michael Wheeler	Feb 12, 2020
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE158944	Genome-wide maps of Dnmt1-dependent DNA methylome in adipocytes	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	5	BEDGRAPH XLSX SRA Run Selector	Yoon Jeong Park	Mar 24, 2021
GSE164265	Disordered N-Terminal DNMT3A Domain Is Required for Mouse Postnatal Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH BW TXT SRA Run Selector	Tianpeng Gu	Mar 21, 2022
GSE166518	Small Nucleolar RNAs in the Dlk1-Gtl2 Imprinting Locus Maintains LT-HSC Self-renewal by Regulation of rRNA Modification and Translation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Mus musculus	19	BEDGRAPH TXT	Jiang Penglei	Jun 03, 2024
GSE176186	Club cells employ regeneration mechanisms during lung tumorigenesis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	32	BEDGRAPH	Reka Toth	Jun 30, 2022
GSE183681	Epigenetic Remodeling by Vitamin C Potentiates Plasma Cell Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	37	BEDGRAPH BW TSV TXT	Chan-Wang Jerry Lio	Sep 06, 2022
GSE201751	Global transcriptional, ATAC-sequencing, and methylation analyses of mouse totipotent potential stem cells and extended pluripotent stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	37	BEDGRAPH TAR TXT	Yiming Sun	May 04, 2022
GSE207293	Phase separation of YAP fusion proteins drives supratentorial ependymoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	27	BEDGRAPH BW TXT	Richard Lu	Oct 27, 2022
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE209965	Decitabine-induced T cell remodeling facilitates a high antitumor response to PD-1 blockade therapy by promoting the expansion and effector function of CD8+ progenitor exhausted T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BEDGRAPH TAR	Jing Nie	Jul 28, 2022
GSE210806	Single-cell triple-omics uncovers DNA methylation as key feature of stemness in the healthy and ischemic adult brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	4532	BEDGRAPH COV	Ana Martin-Villalba	Aug 12, 2022
GSE222726	Inducible disruption of Tet genes results in myeloid malignancy, readthrough transcription, and a heterochromatin-to-euchromatin switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	36	BEDGRAPH MTX TSV TXT	Isaac F. López-Moyado	Apr 17, 2023
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE236728	Synthetic essentiality of thymine DNA glycosylase in p53-deficient cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	65	BEDGRAPH BW MTX NARROWPEAK TSV	Zhenyu Shao	Jun 19, 2024
GSE237681	Smad4 restricts injury-provoked biliary proliferation and carcinogenesis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	22	BEDGRAPH	Aram F. Hezel	Dec 07, 2023
GSE238228	Combinational effect of the ADD domains of DNMT3A and DNMT3L on DNA methylation landscapes in mouse germ cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	68	BEDGRAPH TXT	Naoki Kubo	Mar 17, 2024
GSE248933	Transcriptomic and epigenomic profiling of Tet TKO neural stem cells to study NSC specification and multipotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	36	BEDGRAPH BW CSV TXT	Meelad M Dawlaty	Jul 23, 2024
GSE249430	Cohesin trajectories shape the epigenetic and transcriptional landscape of clustered Protocadherin genes for single neuron identities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	80	BEDGRAPH BW H5 HIC	Lea Kiefer	Jul 29, 2024