GEO Browser - GEO

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34 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing			TSV
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE72432	Brain neuronal cell nuclei with exceptionally high levels of hydroxymethylcytosine	Methylation profiling by high throughput sequencing	Mus musculus	3	TSV SRA Run Selector	Robert J Schmitz	Jul 07, 2022
GSE86907	A novel requirement for Drosha in maintenance of mammalian CG methylation	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	12	TSV TXT SRA Run Selector	Robert J Schmitz	Jul 27, 2017
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array Other	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE109262	Joint profiling of chromatin accessibility, DNA methylation and transcription in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	244	TSV TXT SRA Run Selector	Felix Krueger	Jan 17, 2018
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BW MTX NARROWPEAK TAR TSV TXT SRA Run Selector	Mark F Sabbagh	Sep 06, 2018
GSE112131	Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors (Bis-seq data sets)	Methylation profiling by high throughput sequencing	Mus musculus	4	TSV SRA Run Selector	Dirk Schuebeler	Apr 18, 2019
GSE112136	Mammalian ISWI and SWI/SNF selectively mediate binding of distinct groups of transcription factors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED MATRIX TSV WIG	Dirk Schuebeler	Apr 18, 2019
GSE121690	Single-cell methylation and accessibility of mouse embryos E4.5 to E7.5. First batch.	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	758	TSV SRA Run Selector	Felix Krueger	Sep 30, 2019
GSE121708	Multi-omics profiling of mouse gastrulation at single cell resolution	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5263	TSV	Felix Krueger	Sep 30, 2019
GSE127720	GADD45 promotes locus specific DNA demethylation and 2C cycling in embryonic stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	48	TSV TXT	Emil Karaulanov	May 31, 2019
GSE133687	Single-cell methylation and accessibility of mouse embryoid body cells, day 3 to day 7. Includes wild type and Tet TKO.	Methylation profiling by high throughput sequencing Methylation profiling by SNP array	Mus musculus	192	TSV SRA Run Selector	Felix Krueger	Sep 30, 2019
GSE138102	G9a plays distinct roles in maintaining DNA methylation, retrotransposon silencing and chromatin looping	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	130	BW HIC TSV SRA Run Selector	Qinghong Jiang	Oct 26, 2020
GSE147490	mouse skin epithelial cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	BIGWIG MTX TSV	Tom Samuel Carroll	Sep 04, 2020
GSE147898	DNMT3A haploinsufficiency results in behavioral deficits and global epigenomic dysregulation shared across neurodevelopment disorders [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	198	TSV SRA Run Selector	Harrison Wren Gabel	Nov 13, 2020
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271	BED MTX SEG TSV VCF	Mark Dawson	Nov 08, 2021
GSE165023	Sstr2 knockout mice	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	52	BIGWIG BW MTX TSV	Byoung-Ha Yoon	Jan 04, 2023
GSE167955	De novo DNA methylation controls neuronal maturation during adult hippocampal neurogenesis.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	653	TSV	Gerd Kempermann	Mar 02, 2021
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184	BETA BIGWIG MTX TSV TXT SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE171998	Transcriptional reprogramming of skeletal muscle stem cells by the niche environment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BIGWIG MAT NARROWPEAK TSV TXT	Vahab Soleimani	Mar 17, 2022