GEO Browser - GEO

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136 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing			SRA Run Selector
GSE183934	Perturbation of TET2 condensation induces genome-wide promiscuous DNA hypomethylation and curtails leukemia cell growth	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	50	BW HIC TXT SRA Run Selector	Jia Li	Jun 16, 2024
GSE186007	LABS: linear amplification-based bisulfite sequencing for ultrasensitive cancer detection from cell-free DNA	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	106	COV SRA Run Selector	Xiaolong Cui	Apr 24, 2024
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE182058	The effect of PHZ-induced hemolytic anemia on HSCs [bisulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	11	TXT SRA Run Selector	Rebecca Murdaugh	Dec 04, 2023
GSE183675	Tet2 deficiency altered hematopoietic stem and progenitor cells ageing process	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	53	BW CSV HIC TSV TXT SRA Run Selector	Jia Li	Aug 11, 2023
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE160847	Transgenerational inheritance of epigenetic signatures at CpG islands in mice	Methylation profiling by high throughput sequencing	Mus musculus	20	BEDGRAPH BW SRA Run Selector	Yuta Takahashi	Feb 07, 2023
GSE160367	RRBS in XX and XO Xmas ES cells	Methylation profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Andrew Keniry	Oct 31, 2022
GSE188157	The major urinary protein gene cluster knockout mouse as a novel model for translational metabolism research [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	23	COV SRA Run Selector	Adhideb Ghosh	Aug 01, 2022
GSE72432	Brain neuronal cell nuclei with exceptionally high levels of hydroxymethylcytosine	Methylation profiling by high throughput sequencing	Mus musculus	3	TSV SRA Run Selector	Robert J Schmitz	Jul 07, 2022
GSE135263	The HDAC7-TET2 epigenetic axis is essential during early B lymphocyte development	Methylation profiling by high throughput sequencing	Mus musculus	8	BED BW SRA Run Selector	Maria Vila-Casadesús	Jun 28, 2022
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184	BETA BIGWIG MTX TSV TXT SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE175537	Epigenetic changes induced by in utero dietary challenge result in phenotypic variability in successive generations of mice [BS-seq]	Methylation profiling by high throughput sequencing	Mus musculus	78	COV SRA Run Selector	Felix Krueger	Apr 01, 2022
GSE164265	Disordered N-Terminal DNMT3A Domain Is Required for Mouse Postnatal Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH BW TXT SRA Run Selector	Tianpeng Gu	Mar 21, 2022
GSE174093	Paternal preconception plasticizer alters sperm methylome and embryonic programming.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	42	TXT SRA Run Selector	J.Richard Pilsner	Feb 28, 2022
GSE176391	Tet enzymes are required for mammalian embryonic hematopoiesis	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	16	BW SRA Run Selector	Meelad M Dawlaty	Feb 19, 2022
GSE190862	Mammalian PERIOD2 regulates H2A.Z incorporation into chromatin to orchestrate circadian negative feedback [Mnase-seq]	Methylation profiling by high throughput sequencing	Mus musculus	6	BW SRA Run Selector	Kiran Padmanabhan	Feb 17, 2022
GSE190944	Whole-genome profiling of DNA methylation and hydroxymethylation identify distinct regulatory programs among innate lymphocytes	Methylation profiling by high throughput sequencing	Mus musculus	22	BIGWIG SRA Run Selector	Vincent Peng	Feb 16, 2022
GSE137159	NOMe-seq in differentiating FVBxCAST F1 ES cells with Smarcc1 gene knockdown [NOMe-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	9	TXT SRA Run Selector	Andrew Keniry	Feb 02, 2022
GSE176389	Tet1 regulates embryonic stem cell differentiation programs and development independent of its catalytic activity.	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	50	BW SRA Run Selector	Meelad M Dawlaty	Jan 25, 2022