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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Methylation profiling by high throughput sequencing				MTX
GSE161676	Identifying non-genetic determinants of malignant clonal fitness at single cell resolution	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus synthetic construct	271		VCF TSV SEG MTX BED	Mark Dawson	Nov 08, 2021
GSE111839	Transcriptional and Epigenomic Landscapes of CNS and non-CNS Vascular Endothelial Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42		TXT TSV TAR NARROWPEAK MTX BW SRA Run Selector	Mark F Sabbagh	Sep 06, 2018
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184		TXT TSV MTX BIGWIG BETA SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE188834	Establish a rapid and efficient chemical reprogramming platform	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	165		TXT TSV MTX	Yunkun Lu	May 03, 2023
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150		TXT TSV RDS NARROWPEAK MTX BW BIGWIG	Bernard Klaas van der Veer	Apr 12, 2023
GSE231406	IRF8 defines the epigenetic landscape in postnatal microglia, thereby directing their transcriptome programs	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72		TXT TSV TAB MTX COV	Keita Saeki	Jun 01, 2023
GSE147490	mouse skin epithelial cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8		TSV MTX BIGWIG	Tom Samuel Carroll	Sep 04, 2020
GSE165023	Sstr2 knockout mice	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	52		TSV MTX BW BIGWIG	Byoung-Ha Yoon	Jan 04, 2023
GSE201665	Inhibition of mutant IDH1 promotes cycling of acute myeloid leukemia stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	32		TSV MTX	Emily Gruber	Aug 17, 2022
GSE204908	Single-cell multi-omics profiling links dynamic DNA methylation to cell fate decisions during early mammalian organogenesis.	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	2617		TSV MTX	Felix Krueger	Jul 19, 2022
GSE212715	Tet2 and Tet3 mediated active cytosine hydroxymethylation in Six2 progenitor cells is critical for nephron progenitor differentiation and nephron endowment	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	4		TSV MTX BW	Xiujie Liang	Nov 23, 2022
GSE224563	DNA methylation in the mouse cochlea promotes maturation of supporting cells and contributes to the failure of hair cell regeneration	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52		TSV RDS MTX H5SEURAT H5 COV BW BED	John Duc Nguyen	Feb 07, 2023