GEO Browser - GEO

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57 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL16417	Methylation profiling by high throughput sequencing			SRA Run Selector
GSE129470	A genome-scale map of DNA methylation turnover identifies site-specific dependencies of DNMT and Tet activity	Methylation profiling by high throughput sequencing	Mus musculus	102	TXT SRA Run Selector	Dirk Schuebeler	Apr 24, 2020
GSE109545	A novel role of Tet1/2 proteins in cell cycle progression of trophoblast stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	15	BED COV CSV SRA Run Selector	Myriam Hemberger	May 02, 2018
GSE68575	A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways [T-cells]	Methylation profiling by high throughput sequencing	Mus musculus	18	TXT SRA Run Selector	Tarmo Äijö	Jan 01, 2016
GSE68574	A probabilistic generative model for quantification of DNA modifications enables analysis of demethylation pathways [mESCs]	Methylation profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Tarmo Äijö	Jan 01, 2016
GSE152174	Active turnover of genomic methylcytosine in pluripotent cells	Methylation profiling by high throughput sequencing	Mus musculus	4	BED TXT SRA Run Selector	Thomas Carell	Jun 11, 2020
GSE87747	An electrical pulse stimulation protocol to study acute epigenetic response to muscle cell contraction uncovers acute hydroxymethylation of the exercise-responsive gene Nr4a3 [Bisulfite-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	36	TXT SRA Run Selector	Lars Roed Ingerslev	Feb 22, 2017
GSE136875	Assessment of the stabilty of Treg cell subsets in the bone marrow [targeted Bisulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	15	TXT SRA Run Selector	Philipp Beckhove	Aug 26, 2022
GSE107540	BisPCRSeq analysis of ribosomal DNA in mouse sperm exposed to protein restriction during different critical time windows	Methylation profiling by high throughput sequencing	Mus musculus	64	TXT SRA Run Selector	Amy Frances Danson	Apr 09, 2018
GSE116704	CG dinucleotides enhance promoter activity independent of DNA methylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	186	TAB WIG SRA Run Selector	Dirk Schuebeler	Jan 20, 2019
GSE84589	Cis-regulatory landscape of four cell types of the retina	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Adeno-associated virus Mus musculus synthetic construct	64	TAB SRA Run Selector	Dirk Schuebeler	Oct 25, 2017
GSE119120	Critical role of the UBL-domain in stimulating the E3 ubiquitin ligase activity of UHRF1 towards chromatin	Methylation profiling by high throughput sequencing	Mus musculus	16	TXT SRA Run Selector	Christopher B Mulholland	Aug 29, 2018
GSE110227	DNA methylation change involved in doxorubicin-induced testicular toxicity in mice	Methylation profiling by high throughput sequencing	Mus musculus	3	XLSX SRA Run Selector	KATSUHIDE IGARASHI	Feb 04, 2019
GSE116163	DNA methylation oscillations at CpG poor enhancers in primed embryonic stem cells [amplicon-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	96	COV SRA Run Selector	Felix Krueger	Jun 26, 2018
GSE102449	DNA methylation profiling by MBD-Seq in the mouse seminal vesicles (SVs) and uterus (U) following neonatal DES exposure	Methylation profiling by high throughput sequencing	Mus musculus	10	BW SRA Run Selector	Yin Li	Mar 27, 2018
GSE158460	Dnmt1 has global de novo methylation activity and is specifically targeted to transposable elements	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	90	BED BW CSV XLSX SRA Run Selector	Helene Kretzmer	Jun 18, 2021
GSE184490	Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	132	BED BEDGRAPH TXT SRA Run Selector	Dominic Owens	Dec 16, 2021
GSE137098	Embryonic stem cell-derived neurons as a model system for epigenome maturation during development	Methylation profiling by high throughput sequencing Third-party reanalysis Expression profiling by high throughput sequencing	Mus musculus	53	BIGWIG GTF TXT SRA Run Selector	Ryan Lister	Jul 25, 2023
GSE156193	Epigenetic age-predictions in mice using pyrosequencing, droplet digital PCR or barcoded bisulfite amplicon sequencing	Methylation profiling by high throughput sequencing	Mus musculus	111	TXT SRA Run Selector	Yang Han	Aug 14, 2020
GSE85731	Epigenetic memory of obesity in mouse colonic epithelium	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	45	BED BIGWIG TXT SRA Run Selector	Paul A Wade	Dec 19, 2017
GSE135841	Epigenetic priming by Dppa2/4 in pluripotency facilitates multi-lineage commitment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	189	TXT XLSX SRA Run Selector	Steven William Wingett	Jun 23, 2020