GEO Browser - GEO

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33 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by genome tiling array			BED
GSE14603	Gene Body Hypermethylation of ATM in Peripheral Blood DNA of Bilateral Breast Cancer Patients	Methylation profiling by genome tiling array	Homo sapiens	14	BED GFF PAIR WIG	James Flanagan	Jan 29, 2009
GSE14620	Ontoepigenetic profile of mouse liver reveals dynamic regulation of chromatin during development	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Mus musculus	13	BAR BED CEL	Steven Hart	Jan 29, 2009
GSE15220	Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens	13	BAR BED CEL CHP	Hoi Hung Cheung	Mar 18, 2009
GSE24090	Genome-wide methylation analysis in HPV(-) and HPV(+) squamous cell carcinoma cell lines	Methylation profiling by genome tiling array	Homo sapiens	28	BED CEL TXT	Jung Kim	Dec 01, 2010
GSE22077	MeDIP-on-chip and Pol-II ChIP-on-chip during C2C12 myogenic and BMP2-induced osteogenic differentiation	Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Mus musculus	14	BAR BED CEL	Marlinda Hupkes	Feb 07, 2011
GSE15014	Comprehensive DNA methylation analysis of neuronal and non-neuronal nuclei in the human brain	Methylation profiling by genome tiling array	Homo sapiens	6	BAR BED CEL	Kazuya Iwamoto	Feb 21, 2011
GSE34403	Bisulphite-sequencing of chromatin immunoprecipitated DNA directly informs methylation status of histone-modified DNA	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	8	BED CSV WIG	Mark Robinson	Jan 18, 2012
GSE40166	5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary (tiling array)	Methylation profiling by genome tiling array	Homo sapiens Mus musculus	786	BED CEL	Shraddha Pai	Aug 24, 2012
GSE40167	5-hmC in the brain: abundance in synaptic genes and differences at the exon-intron boundary	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	795	BED CEL	Shraddha Pai	Aug 24, 2012
GSE34941	Integrative Epigenomic Analysis Identifies Biomarkers and Therapeutic Targets in Adult B-Acute Lymphoblastic Leukemia	Expression profiling by array Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	428	BED BIGWIG PAIR	Huimin Geng	Nov 27, 2012
GSE37680	Genome-wide analysis of the cytosine methylation profile in Arabidopsis thaliana crown galls	Methylation profiling by genome tiling array	Arabidopsis thaliana	6	BED BEDGRAPH CEL	Claus Juergen Scholz	Feb 18, 2013
GSE49044	DNA unmethylome profiling by covalent capture of CpG sites (microarray)	Methylation profiling by genome tiling array Other	Homo sapiens	90	BED BEDGRAPH CEL	Viviane Labrie	Aug 27, 2013
GSE53130	Differential Methylation Of The TRPA1 Promoter In Pain Sensitivity	Methylation profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	143	BED	Jordana Bell	Dec 09, 2013
GSE46073	Gene expression and genome-wide location analysis of breast cancer cell-lines	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by genome tiling array	Homo sapiens	41	BED TXT	Kornelia Polyak	Jun 17, 2014
GSE54843	Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	56	BED BIGWIG CEL TXT	Keith D Robertson	Oct 20, 2014
GSE51634	Prenatal stress-induced programming of genome-wide promoter DNA methylation in 5-Htt deficient mice	Methylation profiling by genome tiling array	Mus musculus	22	BED BEDGRAPH CEL	Claus Juergen Scholz	Nov 18, 2014
GSE59352	Assessment of patient-derived tumour xenografts (PDXs) as a discovery tool for cancer epigenomics	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens	30	BED	Paul Guilhamon	Nov 26, 2014
GSE66784	Genome-wide DNA methylation analysis on testicular embryonal carcinoma	Methylation profiling by genome tiling array	Homo sapiens	223	BED CEL	Hoi-Hung Cheung	Mar 12, 2015
GSE38548	Somatic cell fusions reveal extensive heterogeneity in basal-like breast cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array Genome variation profiling by SNP array Methylation profiling by genome tiling array	Homo sapiens	106	BED BW CEL FPKM_TRACKING PROBSCOREISLAND TXT	Kornelia Polyak	Jun 09, 2015
GSE63237	Dynamics of MBD2 deposition across methylated DNA regions during malignant transformation of human mammary epithelial cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Methylation profiling by genome tiling array	Homo sapiens	30	BED BEDGRAPH CEL	Robert Dante	Jun 17, 2015