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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Methylation profiling by array	Homo sapiens			NARROWPEAK
GSE256135	DNA hypomethylation promotes UHRF1- and SUV39H1/H2-dependent crosstalk between H3K18ub and H3K9me3 to reinforce heterochromatin states	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	77		BROADPEAK BW IDAT NARROWPEAK TXT	Scott Rothbart	Dec 03, 2024
GSE261324	NF-κB- and TET2-mediated macrophage reprogramming overrides the anti-inflammatory effects of hypoxia and improves responses in human cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	88		IDAT NARROWPEAK	Esteban Ballestar	Oct 09, 2024
GSE247428	CTCF deletion alters the pluripotency and DNA methylation profile of human iPSCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	10		BIGWIG IDAT NARROWPEAK SF	Wolfgang Wagner	Nov 24, 2023
GSE202776	Epigenetic heterogeneity and transcriptional drivers of triple-negative breast cancer	Expression profiling by high throughput sequencing Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	386		BW IDAT NARROWPEAK	Kornelia Polyak	Nov 09, 2023
GSE182317	Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by genome tiling array Methylation profiling by array Other	Homo sapiens	171		HIC IDAT NARROWPEAK RDS TXT	Rico Hagelaar	Apr 29, 2023
GSE210277	Synthetic epigenetic reprogramming of mesenchymal to epithelial states using the CRISPR/dCas9 platform in triple negative breast cancer	Methylation profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	45		BROADPEAK BW IDAT NARROWPEAK	Joe Cursons	Apr 17, 2023
GSE198674	RNA mis-splicing sensitizes SETD2-mutant kidney cancer cells to DNMTi	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	132		BEDGRAPH BROADPEAK IDAT NARROWPEAK	Hyo Sik Jang	Jan 27, 2023
GSE207266	Unified rhombic lip origins of Group 3 and Group 4 medulloblastoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens Mus musculus	68		IDAT NARROWPEAK	Kyle S Smith	Sep 23, 2022
GSE171074	The potential of epigenetic therapy to target the 3D epigenome in endocrine-resistant breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Other Methylation profiling by high throughput sequencing	Homo sapiens	88		BED BW HIC IDAT NARROWPEAK TXT	Joanna Achinger-Kawecka	Dec 12, 2021
GSE145747	Integrative omics analyses reveal epigenetic memory in diabetic cells regulating genes associated with kidney dysfunction.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	48		IDAT NARROWPEAK TXT	Anita Bansal	Oct 28, 2020
GSE109399	Epigenetic characterization of glioblastoma stem cells	Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	70		BEDGRAPH IDAT NARROWPEAK	Paul Guilhamon	Nov 14, 2019
GSE103505	Whole genome bisulphite sequencing using the Illumina X system	Methylation profiling by array Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	19		IDAT NARROWPEAK TXT	Andrew Johnston	Jul 12, 2018