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777 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TSV
GSE251935	Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	14	BED MCOOL PQ TSV	Nezar Abdennur	Feb 01, 2024
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023
GSE198518	Splicing modulators impair DNA damage response and induce killing of cohesin-mutant MDS/AML	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	46	BW TSV TXT	Karen Adelman	Jun 30, 2023
GSE188486	Leveraging the Epigenomic Landscape to identify Histology-Specific Master transcription factors and to functionally annotate risk loci in renal cell carcinoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	144	BED BW TSV SRA Run Selector	Elio Adib	Nov 01, 2022
GSE175684	HyDrop: droplet-based scATAC-seq and scRNA-seq using dissolvable hydrogel beads	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	20	BW TAR TSV SRA Run Selector	Stein Aerts	Jun 04, 2021
GSE194028	Systematic benchmarking of single-cell ATAC sequencing protocols	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	56	H5AD MTX TBI TSV	Stein Aerts	May 22, 2023
GSE193240	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq II]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE147672	Single-cell epigenomic identification of inherited risk loci in Alzheimer’s and Parkinson’s disease	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	162	BED BIGWIG NARROWPEAK RDS TSV SRA Run Selector	Carlos Aguilar	Jul 26, 2020
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE242324	Single-cell ATAC-seq analysis of human plasma cell differentiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	CSV TSV	Elina Alaterre	Apr 25, 2024
GSE199576	Single cell transcriptomic analysis and Epigenomic profiling of human Axioloids	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BW MTX TSV	Cantas Alev	Nov 17, 2022
GSE156150	Paired Imaging and Sequencing of Protein-DNA Interactions in Single Human Cells Using microDamID	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	74	CSV TSV SRA Run Selector	Nicolas Altemose	Aug 13, 2020
GSE97938	Genome-wide characterization of BCL6/STAT5-switch target genes identifies reprogramming of DNA damage response as a novel branch of RAC1/PAK1 signalling	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	TSV SRA Run Selector	Andreia Jesus Amaral	Apr 30, 2019
GSE142285	Designing a single cell ATAC-Seq (scATAC-Seq) dataset to validate long read RNA-Seq isoforms and benchmark scATAC-Seq analysis methods	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED CSV MTX TAB TSV SRA Run Selector	Shanika Amarasinghe	Dec 19, 2019
GSE244029	Single cell ATAC-sequencing analysis of human SUV39H1-knockout CAR T compared to control CAR T cells (mock) in a xenograft model of lung adenocarcinoma	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED CSV MTX TBI TSV	Sebastian Amigorena	Oct 31, 2023
GSE244032	SUV39H1 Ablation Enhances Long-Term CAR-T Function in Solid Tumors.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BED CSV MTX RCC TBI TSV	Sebastian Amigorena	Oct 30, 2023
GSE193321	The transcriptional and regulatory identity of erythropoietin producing cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	154	MTX TSV TXT	Ido Amit	Mar 13, 2023
GSE123574	SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	23	TSV	Ana Maria Aransay	Sep 12, 2019
GSE159417	Comparative regulatory analysis of single cell data reveals a novel B cell subpopulation in chronic lymphocytic leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED MTX TSV	Joseph G Arthur	Jun 29, 2021
GSE147338	Unique Properties of a Subset of Human Pluripotent Stem Cells With High Capacity for Self-Renewal [FAST-ATAC]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	TSV SRA Run Selector	Christopher Lee Baker	Mar 30, 2020