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93 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TAB
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE21202	CpG islands recruit a histone H3 lysine 36 demethylase	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	TAB TXT	Peter J Park	Apr 27, 2010
GSE38284	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	TAB TXT SRA Run Selector	Peter J Park	Jul 16, 2012
GSE38771	Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	13	BEDGRAPH CALLS PAIR TAB	Peter J Park	Jul 16, 2012
GSE51428	Transcriptomic profiling reveals new aspects of progestin signaling in breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TAB TXT SRA Run Selector	Angeliki Magklara	Jun 05, 2014
GSE62063	B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	76	BED BW TAB WIG SRA Run Selector	Marei Dose	Dec 04, 2014
GSE69539	Progesterone receptor transcriptome and cistrome in decidualized human endometrial stromal cells [ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	TAB SRA Run Selector	Francesco J DeMayo	Jun 05, 2015
GSE69542	FOXO1 is required for binding of PR on IRF4, novel transcriptional regulator of endometrial stromal decidualization [ChIP]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	TAB SRA Run Selector	Francesco J DeMayo	Jun 05, 2015
GSE53215	Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target [Seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	16	BED TAB SRA Run Selector	Prasoon Agarwal	Dec 31, 2015
GSE69253	Genome-wide profiling of histone H3 lysine 27 and lysine 4 trimethylation in multiple myeloma reveals the importance of Polycomb gene targeting and highlights EZH2 as a potential therapeutic target	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED CEL TAB	Prasoon Agarwal	Dec 31, 2015
GSE79873	Unique long non-coding RNA expression signature in ETV6/RUNX1-driven B-cell precursor acute lymphoblastic leukemia	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	103	TAB TXT	Farzaneh Ghazavi	Sep 26, 2016
GSE94037	FOXO1 is required for binding of PR on IRF4, novel transcriptional regulator of endometrial stromal decidualization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	TAB	Franco Demayo	Jan 25, 2017
GSE94038	Progesterone receptor transcriptome and cistrome in decidualized human endometrial stromal cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	15	TAB	Franco Demayo	Jan 25, 2017
GSE102237	Poly(ADP-ribosyl)ation dependent changes in CTCF-chromatin binding and gene expression in breast cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BED TAB SRA Run Selector	Vladimir B Teif	Aug 11, 2017
GSE106258	BRD4 promotes DNA repair and mediates the formation of TMPRSS2-ERG gene rearrangements in prostate cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BIGWIG TAB SRA Run Selector	Ram Mani	Jan 04, 2018
GSE118514	CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	32	BED GFF NARROWPEAK TAB TXT XLS SRA Run Selector	Yu (Phoebe) Guo	Aug 15, 2018
GSE110637	T-ALL	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	113	BED TAB XLS	Karen Verboom	Sep 11, 2018
GSE110143	BAP1 complex promotes transcription by opposing PRC1-mediated H2A ubiquitylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	83	BW TAB	Nicolas Servant	Nov 21, 2018
GSE98483	p63 controls the enhancer landscape during keratinocyte differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BED TAB SRA Run Selector	Jo Huiqing Zhou	Dec 18, 2018