GEO Browser - GEO

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36 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		RESULTS
GSE222113	Comparative characterization of human accelerated regions in neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Pan troglodytes	47	MTX RESULTS TSV TXT	Yin Shen	Nov 12, 2024
GSE245087	Topoisomerase I (TOP1) is a functional mitotic interactor of the bookmarking factor HNF1B	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	43	RESULTS	Marco PONTOGLIO	Oct 01, 2024
GSE183627	Investigating the regulatory role of KMT2D in neurodeveolopment using organoid and single cell techniques	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	86	BW MTX RESULTS TAR TSV ZIP	Yingying Zhao	Sep 06, 2024
GSE263611	IFN-γ activates an immune-like regulatory network in the cardiac vascular endothelium	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	NARROWPEAK RESULTS	Timothy D Arthur	Jul 12, 2024
GSE214916	Enhancer engagement sustains oncogenic transformation and progression of B-cell precursor acute lymphoblastic leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	57	BEDPE BW MTX NARROWPEAK RESULTS TSV	Stefano Di Giovenale	Jun 27, 2024
GSE176493	Comprehensive target engagement by EZH2 inhibitor CPI-0209 allows for preferential targeting of ARID1A mutant urothelial carcinoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	252	BED BROADPEAK BW NARROWPEAK RESULTS TXT	Patrick Trojer	Jun 26, 2024
GSE243107	O-GlcNAcylation controls pro-fibrotic transcriptional regulatory signaling in hepatic stellate cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	43	BIGWIG BW CSV RESULTS	Jérôme Eeckhoute	May 22, 2024
GSE228247	3D genomic analysis reveals novel enhancer-hijacking caused by complex structural alterations that drive oncogene overexpression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BEDPE BW RESULTS	Xiaoyang Zhang	Apr 01, 2024
GSE241927	Dissection of a CTCF topological boundary uncovers principles of enhancer-oncogene regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	65	BW HIC RESULTS	Kyung Lock Kim	Mar 06, 2024
GSE240506	Histone lysine demethylase 4 family proteins maintain the transcriptional program and adrenergic cellular state of MYCN-amplified neuroblastoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	26	NARROWPEAK RESULTS	Hongjian Jin	Mar 02, 2024
GSE243765	Mechanoresponsive genomic enhancers potentiate the cellular response to matrix stiffness	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	63	COUNTS NARROWPEAK RESULTS TAR TXT	Timothy E Reddy	Jan 31, 2024
GSE252653	Short-chain fatty acid metabolites propionate and butyrate are unique epigenetic regulatory elements linking diet, metabolism and gene expression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	NARROWPEAK RESULTS	Michael Nshanian	Jan 10, 2024
GSE244255	CRISPR screening in human trophoblast stem cells reveals both shared and distinct aspects of human and mouse placental development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	65	BW RESULTS	Eri H Kobayashi	Nov 10, 2023
GSE203322	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BIGWIG BW MTX RESULTS TSV TXT	Masaki Nomura	Oct 31, 2023
GSE240246	Genome-Wide Characterization of TAZ Binding Sites in Mammary Epithelial Cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	RESULTS	Tao Liu	Oct 16, 2023
GSE235858	Dynamic enhancer landscapes in human craniofacial development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BROADPEAK BW NARROWPEAK RESULTS SNAP TXT	Laura E Cook	Sep 11, 2023
GSE186521	Regulatory Enhancer Profiling of Mesenchymal-type Gastric Cancer Reveals Subtype-Specific Epigenomic Landscapes and Targetable Vulnerabilities	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	163	BW RESULTS TXT WIG SRA Run Selector	Shamaine Ho	Aug 16, 2023
GSE207773	Therapeutic induction of mesenchymal-epithelial transition via epigenetic reprogramming curtails metastatic progression and sensitizes breast cancers to treatment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	39	RESULTS	Diwakar Pattabiraman Pattabiraman	Aug 02, 2023
GSE173316	Functional characterization of Alzheimer´s disease genetic variants in microglia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	26	RESULTS TXT	Yin Shen	Jul 28, 2023
GSE227664	Genome-wide transcriptional, epigenetic, and topological changes occurring in human natural killer cells in response to HDAC inhibitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	27	BED BW HIC RESULTS	Hyoung-Pyo Kim	Jun 02, 2023