26 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterHomo sapiens Remove filterMCOOL
GSE138543
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Homo sapiens
22 Mikhail Magnitov Mar 22, 2021
GSE168233
SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization, and Chromatin Mechanical Properties
  • Link icon Homo sapiens
40 Mikhail Magnitov Mar 29, 2022
GSE179184
Mapping the 3D genome and epigenome in SARS-CoV-2 infected human cells
  • Link icon Homo sapiens
65 Ruoyu Wang Jul 23, 2021
GSE186599
TULIPs decorate the three-dimensional genome of PFA ependymoma
  • Other
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Homo sapiens
160 Marco Gallo Jul 05, 2024
GSE215172
The 3D chromatin landscape of rhabdomyosarcoma [HiC]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Homo sapiens
8 Benjamin Stanton Jun 13, 2023
GSE225087
Genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Homo sapiens
6 Arkadiy Golov Dec 24, 2023
GSE229966
Extreme structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs
  • Link icon Homo sapiens
74 Argyris Papantonis Mar 18, 2024
GSE238256
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor
  • Link icon Homo sapiens
51 Argyris Papantonis Apr 24, 2024
GSE251935
Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Homo sapiens
14 Nezar Abdennur Feb 01, 2024
GSE266750
GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer
75 Feng Yue Dec 19, 2024
GSE214811
Stage-specific erythroid cell three-dimensional chromatin architecture and transcription factors binding provide insight of human erythropoiesis
  • Link icon Homo sapiens
99 Dong Li May 06, 2023
GSE236637
ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry
  • Link icon Homo sapiens
33 Mo Zhang Nov 07, 2023
GSE256246
Putative looping factor ZNF143/ZFP143 is an essential transcriptional regulator with no looping function.
  • Other
  • Genome binding/occupancy profiling by high throughput sequencing
132 Domenic Narducci Mar 07, 2024
GSE165463
Human Core Nucleoporin Selectively Regulates Gene Transcription but is Dispensable for 3D Genome Organization
  • Link icon Homo sapiens
42 chuangye Qi Sep 16, 2022
GSE152136
Subtype-Specific and Structure Variation-Induced Chromatin Spatial Reorganization in Acute Myeloid Leukemia
  • Link icon Homo sapiens
135 Feng Yue Jul 19, 2022
GSE183806
Chromatin architecture of B cell development during the humoral immune response
107 Ashley Stephen Doane Sep 09, 2021
GSE190567
NANOG prion-like assembly mediates DNA bridging
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Homo sapiens
12 chuangye Qi Feb 15, 2022
GSE244379
Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13)
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
  • Link icon Homo sapiens
58 Christoph Plass Aug 21, 2024
GSE207225
Ultra-deep 3D genome structure mapping with Region Capture Micro-C
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
18 Viraat Y Goel Jul 12, 2022
GSE277721
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
  • Other
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Homo sapiens
142 Jesse R Dixon Oct 07, 2024