Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
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GSE138543 |
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
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22 |
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Mikhail Magnitov | Mar 22, 2021 | ||
GSE168233 |
SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization, and Chromatin Mechanical Properties
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|
40 |
|
Mikhail Magnitov | Mar 29, 2022 | ||
GSE179184 |
Mapping the 3D genome and epigenome in SARS-CoV-2 infected human cells
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|
65 |
|
Ruoyu Wang | Jul 23, 2021 | ||
GSE186599 |
TULIPs decorate the three-dimensional genome of PFA ependymoma
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|
160 | Marco Gallo | Jul 05, 2024 | |||
GSE215172 |
The 3D chromatin landscape of rhabdomyosarcoma [HiC]
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|
8 |
|
Benjamin Stanton | Jun 13, 2023 | ||
GSE225087 |
Genome-wide nucleosome-resolution map of promoter-centered interactions in human cells corroborates the enhancer-promoter looping model
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6 | Arkadiy Golov | Dec 24, 2023 | |||
GSE229966 |
Extreme structural heterogeneity rewires glioblastoma chromosomes to sustain patient-specific transcriptional programs
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74 | Argyris Papantonis | Mar 18, 2024 | |||
GSE238256 |
Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor
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51 | Argyris Papantonis | Apr 24, 2024 | |||
GSE251935 |
Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization
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14 | Nezar Abdennur | Feb 01, 2024 | |||
GSE266750 |
GATA6 is a Novel Regulator of Gene Expression and 3D Genome in Colorectal Cancer
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75 | Feng Yue | Dec 19, 2024 | ||
GSE214811 |
Stage-specific erythroid cell three-dimensional chromatin architecture and transcription factors binding provide insight of human erythropoiesis
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99 | Dong Li | May 06, 2023 | |||
GSE236637 |
ZNF143 deletion alters enhancer/promoter looping and CTCF/cohesin geometry
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33 |
|
Mo Zhang | Nov 07, 2023 | ||
GSE256246 |
Putative looping factor ZNF143/ZFP143 is an essential transcriptional regulator with no looping function.
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132 | Domenic Narducci | Mar 07, 2024 | ||
GSE165463 |
Human Core Nucleoporin Selectively Regulates Gene Transcription but is Dispensable for 3D Genome Organization
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|
42 |
|
chuangye Qi | Sep 16, 2022 | ||
GSE152136 |
Subtype-Specific and Structure Variation-Induced Chromatin Spatial Reorganization in Acute Myeloid Leukemia
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135 | Feng Yue | Jul 19, 2022 | |||
GSE183806 |
Chromatin architecture of B cell development during the humoral immune response
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|
|
107 |
|
Ashley Stephen Doane | Sep 09, 2021 | |
GSE190567 |
NANOG prion-like assembly mediates DNA bridging
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|
12 |
|
chuangye Qi | Feb 15, 2022 | ||
GSE244379 |
Altered enhancer-promoter interaction leads to MNX1 expression in pediatric acute myeloid leukemia with t(7;12)(q36;p13)
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58 | Christoph Plass | Aug 21, 2024 | |||
GSE207225 |
Ultra-deep 3D genome structure mapping with Region Capture Micro-C
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18 |
|
Viraat Y Goel | Jul 12, 2022 | |
GSE277721 |
Genome-wide in vivo dynamics of cohesin-mediated loop extrusion and its role in transcription activation
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|
142 |
|
Jesse R Dixon | Oct 07, 2024 |