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402 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BROADPEAK
GSE235010	ATAC-Seq analysis of EZH2 mutants in isogenic cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BROADPEAK BW	Julian Aldana	Jul 17, 2023
GSE235011	H3K27me3 CUT&Tag analysis of EZH2 mutants in isogenic cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BROADPEAK BW	Julian Aldana	Jul 17, 2023
GSE235014	EZH2 mutants in isogenic cell lines	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	28	BROADPEAK BW	Julian Aldana	Jul 17, 2023
GSE221611	Cut&Run SU-DIPG13 cells treated Sulfopin/Vorinostat/Sulfopin+Vorinostat or DMSO	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BROADPEAK BW	Danielle Algranati	Jun 24, 2024
GSE221614	Cut&Run and MARS-seq on SU-DIPG13 cells treated Sulfopin/Vorinostat/Sulfopin+Vorinostat or DMSO	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	26	BROADPEAK BW	Danielle Algranati	Jun 24, 2024
GSE85628	Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	75	BED BROADPEAK NARROWPEAK SRA Run Selector	Yen-Sin Ang	Dec 15, 2016
GSE85631	Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	105	BED BROADPEAK NARROWPEAK	Yen-Sin Ang	Dec 15, 2016
GSE123569	SIGNAL INTEGRATION AND TRANSCRIPTIONAL REGULATION OF THE INFLAMMATORY RESPONSE MEDIATED BY THE GM-/M-CSF SIGNALING AXIS IN HUMAN MONOCYTES [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BROADPEAK SRA Run Selector	Ana Maria Aransay	Sep 12, 2019
GSE107734	Bladder Cancer Associated Mutations in RXRA activate Peroxisome Proliferator-Activated Receptors to Drive Urothelial Proliferation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BROADPEAK NARROWPEAK SRA Run Selector	Vivek K Arora	Dec 07, 2017
GSE180938	Oncogenic lncRNAs alter epigenetic memory at a fragile chromosomal site in human cancer cells [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BROADPEAK SRA Run Selector	Songjoon Baek	Mar 09, 2022
GSE228221	Multi-omics integration identifies progenitor-state specific PBRM1-PIAS1 cooperation in repressing differentiation in epithelial tissue	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	32	BIGWIG BROADPEAK CSV	Xiaomin Bao	Jan 01, 2024
GSE157090	Loss of UTX/KDM6A and the activation of FGFR3 converge to regulate differentiation gene expression programs in bladder cancer [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BROADPEAK BW NARROWPEAK SRA Run Selector	Douglas Barrows	Sep 15, 2020
GSE157091	Loss of UTX/KDM6A and the activation of FGFR3 converge to regulate differentiation gene expression programs in bladder cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	54	BROADPEAK BW NARROWPEAK	Douglas Barrows	Sep 15, 2020
GSE92477	Chromatin state upon MSK1 downregulation by shRNA in dormant bone metastatic (DBM) cells.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BROADPEAK SRA Run Selector	Antoni Berenguer-LLergo	Nov 15, 2017
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE149042	H3K27me3 in vitro ChIP-Sequencing data [H3K27me3_PA_SCC25]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BROADPEAK BW XLS SRA Run Selector	Antoni Berenguer-LLergo	Nov 16, 2021
GSE149043	H3K4me1in vitro ChIP-Sequencing data [H3K4me1_PA_SCC25_VDH15]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BROADPEAK BW XLS SRA Run Selector	Antoni Berenguer-LLergo	Nov 16, 2021
GSE149044	H3K4me3 in vitro ChIP-Sequencing data [H3K4me3_OA_SCC25_VDH15]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BROADPEAK BW XLS SRA Run Selector	Antoni Berenguer-LLergo	Nov 16, 2021
GSE149045	H3K4me3 in vitro ChIP-Sequencing data [H3K4me3_PA_SCC25]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BROADPEAK BW XLS SRA Run Selector	Antoni Berenguer-LLergo	Nov 16, 2021
GSE149046	H3K4me3 in vitro ChIP-Sequencing data [H3K4me3_PLKO_Set1AKD_PA_VDH15]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	BROADPEAK BW XLS SRA Run Selector	Antoni Berenguer-LLergo	Nov 16, 2021