GEO Browser - GEO

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90 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TXT
GSE245957	txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	2	RDS TBI TSV TXT	Ryan Mulqueen Mulqueen	Oct 20, 2023
GSE212606	A global view of aging and Alzheimer’s pathogenesis-associated cell population dynamics in mammalian brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	3	CSV TXT	Junyue Cao	May 26, 2023
GSE256434	Flexible and high-throughput simultaneous profiling of gene expression and chromatin accessibility in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	4	BED MTX NARROWPEAK TXT	Volker Soltys	Feb 28, 2024
GSE174226	High-content single-cell combinatorial indexing	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	6	BED CSV RDS TSV TXT SRA Run Selector	Ryan M Mulqueen	May 28, 2021
GSE207308	SHARE-seqV2 for single-cell epigenomic and transcriptomic mapping of human hematopoiesis at scale	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	CSV H5 TSV TXT	Sai Ma	Oct 04, 2022
GSE243020	The loss of an orphan nuclear receptor NR2E3 augments Wnt/β-Catenin signaling via epigenetic dysregulation that promotes the Sp1-β catenin-p300 interactions in hepatocellular carcinoma.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TXT	Kyounghyun Kim	Aug 26, 2024
GSE236960	BRD9 determines the cell fate of hematopoietic stem cells by regulating chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	BW TXT	Weijia Zang	Oct 31, 2023
GSE205342	ZBTB12-HERVH-LncRNA axis is a molecular barrier for dedifferentiation of human pluripotent stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW TXT	Dasol Han	Dec 26, 2022
GSE185844	Scavenger Receptor SCARB2 Drives Hepatic Carcinoma Initiation by Enhancing MYC Transcriptional Activity and Supporting Cancer Stem Cell Traits.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	BW MTX TSV TXT	Yang Gao	Aug 11, 2023
GSE168600	KLF5 governs sphingolipid metabolism and barrier function of the skin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	NARROWPEAK TSV TXT SRA Run Selector	Yejing Ge	Aug 18, 2022
GSE161920	Smarca4 inactivation promotes lineage-specific transformation and early metastatic features in the lung [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BED TXT SRA Run Selector	Carla Concepcion	Sep 07, 2021
GSE207673	Next-generation sequencing facilitates quantitative analysis of CON and PMB treated HepG2 cells and CreAlbMYC and CreAlbScarb2F/FMYC mice liver transcriptomes, and CUT&Tag analysis genome-wide maps of chromatin state in CTRLcas9 and SCARB2cas9 HepG2 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BW TXT	Yang Gao	Aug 11, 2023
GSE248639	Nynrin preserves hematopoietic stem cell function by inhibiting the mitochondrial permeability transition pore opening.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BW NARROWPEAK TXT	CHENGFANG ZHOU	Jun 01, 2024
GSE140203	Integrative single-cell chromatin and transcriptome profiling uncovers cell-type specific regulatory interactions	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BED TXT SRA Run Selector	Sai Ma	Oct 23, 2020
GSE240258	PRMT1 inhibition activates the interferon pathway to potentiate antitumor immunity and enhance checkpoint blockade efficacy in melanoma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BW GTF TXT	Liyuan Zhou	Nov 07, 2023
GSE155430	A single-cell epigenetic atlas of human IDH-mutant glioma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED MTX TSV TXT	Aaron Diaz	Oct 20, 2021
GSE244510	KDM6A Regulates Immunogenicity of Multiple Myeloma (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	24	TXT	Alberto Riva	Oct 01, 2024
GSE189570	HMGA1 Chromatin Regulators Drive MPN Progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	25	H5 TXT	Linda M.S. Resar	Oct 05, 2023
GSE207516	Transcriptonal and epigenetic profiling of neuroblastoma cells based on CD49b expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BED BW TXT	Allan M Goldstein	Dec 05, 2023
GSE211263	Pbrm1 regulates interferon signaling in mouse AML	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BW NARROWPEAK TXT	Bin E Li	Jul 11, 2023