GEO Browser - GEO

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59 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TSV
GSE87064	The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	868	BED BW MTX TSV TXT	Beisi Xu	May 03, 2017
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE143148	The histone demethylase JMJD2B regulates endothelial-to-mesenchymal transition [HTS]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED CSV TSV SRA Run Selector	David John	Jan 08, 2020
GSE148695	SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	148	BED BW MTX TSV	Wei Gu	Oct 05, 2021
GSE155430	A single-cell epigenetic atlas of human IDH-mutant glioma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED MTX TSV TXT	Aaron Diaz	Oct 20, 2021
GSE162739	BAP1 activity regulates Polycomb occupancy and global chromatin condensation counteracting diffuse PCGF3/5-dependent H2AK119ub1 deposition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	192	BED RPKM TSV TXT SRA Run Selector	Federico Rossi	Jun 27, 2021
GSE165049	HOTTIP reinforces CTCF-defined TAD boundaries by forming R-loops to drive Wnt/b-catenin target gene expression in AML leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	51	BED H5 MTX TSV TXT SRA Run Selector	Suming Huang	Feb 18, 2022
GSE167232	Integration of M. tuberculosis phenotype with single cell RNA-seq to interrogate host macrophage heterogeneity in vivo.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	24	CSV RDS TSV SRA Run Selector	Davide Pisu	Apr 28, 2021
GSE167552	The stress response regulator HSF1 modulates natural killer cell anti-tumour immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED BW TAR TSV	Kathryn Grace Hockemeyer	Feb 26, 2021
GSE168600	KLF5 governs sphingolipid metabolism and barrier function of the skin	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	16	NARROWPEAK TSV TXT SRA Run Selector	Yejing Ge	Aug 18, 2022
GSE169431	Transcriptional Activation of Regenerative Haematopoiesis via Niche Sensing	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus Mus musculus	42	H5 NARROWPEAK TBI TSV	Tomer Itkin	Apr 01, 2024
GSE169725	Prrx1 is a Master Transcription Factor of myofibroblastic Cancer-Associated Fibroblasts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	109	BED BW TSV	Seok-Hyung Kim	Dec 31, 2021
GSE179043	Transcriptional programs dictating Schwann cell transformation in MPNST	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	50	CSV H5 TAR TBI TSV TXT	Lai Man (Natalie) Wu	Nov 07, 2022
GSE181499	ZNF384 fusion oncoproteins drive lineage aberrancy in acute leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	81	BW MTX NARROWPEAK TSV TXT	QINGSONG GAO	Aug 31, 2022
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183876	Epigenetic basis of oncogenic-Kras mediated epithelial-cellular proliferation and plasticity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	68	BIGWIG NARROWPEAK TSV	Preetish Kadur Lakshminarasimha Murthy	Dec 22, 2021
GSE185844	Scavenger Receptor SCARB2 Drives Hepatic Carcinoma Initiation by Enhancing MYC Transcriptional Activity and Supporting Cancer Stem Cell Traits.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	BW MTX TSV TXT	Yang Gao	Aug 11, 2023
GSE189600	Hepatocytes demarcated by EphB2 contribute to the progression of non-alcoholic steatohepatitis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	CSV MTX TSV SRA Run Selector	Yang Xiao	Feb 08, 2023
GSE190977	TEAD1 trapping by the Q353R-Lamin A/C causes dilated cardiomyopathy.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BW CSV H5 MTX TSV	Shintaro Yamada	Mar 06, 2023
GSE193321	The transcriptional and regulatory identity of erythropoietin producing cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	154	MTX TSV TXT	Ido Amit	Mar 13, 2023