GEO Browser - GEO

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23 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		MTX
GSE128671	Replicational dilution of H3K27me3 in mammalian cells and the role of poised promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	47	BW MTX TSV TXT SRA Run Selector	Ramesh Shivdasani	Jan 17, 2020
GSE133417	A Congenital Anemia Dissociates the Pleiotropic Functions of Master Transcription Factor GATA1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	60	BW MTX NARROWPEAK TSV	Caleb Lareau	Dec 31, 2021
GSE139950	Chromatin-accessibility estimation from single-cell ATAC data with scOpen	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED MTX TSV SRA Run Selector	Zhijian Li	Sep 17, 2021
GSE148695	SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	148	BED BW MTX TSV	Wei Gu	Oct 05, 2021
GSE162798	Simple oligonucleotide-based multiplexing of single-cell chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BED CSV MTX TBI TSV TXT SRA Run Selector	Anil K Sood	Oct 20, 2021
GSE172335	Nucleotide depletion promotes cell fate transitions by inducing DNA replication stress	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	284	BW CSV MTX TXT	Brian Do	May 04, 2024
GSE179705	Cancer-associated fibroblasts recapitulate phenotypes and functions across tumor types and species	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	BED MTX TSV SRA Run Selector	Michael Januszyk	Feb 01, 2023
GSE180732	Gene regulatory basis of bystander activation in CD8+ T cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	71	BW MTX TSV	Andrew Grimson	Feb 26, 2024
GSE182664	Pharmacological inhibition of CDK4/6 augments long-term anti-tumor immunity through the induction of T cell memory	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	74	BW MTX TDF TSV	Emily Jane Lelliott	Aug 25, 2021
GSE183432	PRMT5 Promotes Progression of Chronic Lymphocytic Leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61	BW CLOUPE CSV MTX TSV TXT	Janek S Walker	Dec 07, 2022
GSE205481	TRIM28 modulates progesterone and estrogen signaling in endometrium	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	57	BW MTX TSV	Franco Demayo	Jun 04, 2023
GSE212482	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BED MTX TAR TSV	Michael Januszyk	Oct 21, 2022
GSE213597	ETV6 Represses Inflammatory Response Genes and Regulates HSPC Function During Stress Hematopoiesis in Mice	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	27	BED BW HIC MTX TBI TSV	Kim Nichols	Aug 24, 2023
GSE216464	Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	32	BED MTX TSV	Jason Buenrostro	Mar 28, 2023
GSE216947	Chronic viral mimicry induction following p53 loss promotes immune evasion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	MTX TSV	Sajid A Marhon	Mar 26, 2024
GSE221300	Aberrant cell state plasticity mediated by developmental reprogramming precedes colorectal cancer initiation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	19	BIGWIG BW MTX TSV	Nilay Sethi	Apr 03, 2023
GSE224513	Cooperative super-enhancer inactivation caused by heterozygous loss of CREBBP and KMT2D skews B-cell fate decisions and accelerates development of T-cell depleted lymphomas.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	143	BIGWIG BROADPEAK BW MTX NARROWPEAK TSV	Christopher Russell Chin	Feb 19, 2024
GSE225527	Overexpression of FOXO1 enhances CAR T cell polyfunctionality, metabolic fitness and efficacy against solid tumors	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	54	MTX NARROWPEAK TSV	Kevin C sek	Jan 18, 2024
GSE229029	Deciphering lineage specification during early embryogenesis in mouse gastruloids using integrative multi-layered proteomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	44	MTX NARROWPEAK TSV	Suzan Stelloo	May 21, 2024
GSE229169	Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate motor cortex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus	46	MTX TSV	Bing Ren	Oct 31, 2023