GEO Browser - GEO

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62 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL19057	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		BED
GSE73867	Nephron endowment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED TXT WIG	Andrew P McMahon	Jan 31, 2016
GSE86912	Quantitative Proteomic and Transcriptomic Analysis Reveals Post-Transcriptional Regulation of Mitochondrial Biogenesis during Erythropoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BED WIG	Jian Xu	May 15, 2017
GSE88817	In situ CAPTURE of chromatin interactions by biotinylated dCas9	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	175	BED WIG	Jian Xu	Aug 24, 2017
GSE89418	EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	58	BED TXT WIG	Melissa Kinney	Jan 01, 2018
GSE98119	The energetics and physiological impact of cohesin extrusion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	352	BED BEDGRAPH BW HIC NARROWPEAK TXT SRA Run Selector	Seolkyoung Jung	May 01, 2018
GSE98843	Epigenome analysis reveals novel aspects of ILC2 activation and supports a pathogenic role in asthma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	BED TXT SRA Run Selector	Ralph Stadhouders	Mar 14, 2018
GSE103602	Genome-wide H3K4me3 and gene expression before and after methionine restriction in human cancer cells and mouse liver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	28	BED TXT SRA Run Selector	Jason W Locasale	Jan 01, 2018
GSE111009	Cell type-dependent control of enhancer and p53 transcriptional activity by p63	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	98	BED BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Morgan A Sammons	Feb 11, 2019
GSE115096	HOXBLINC is aberrantly expressed in acute myeloid leukemia and functions as a potent oncogenic long non-coding RNA in leukemogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	40	BED TXT SRA Run Selector	Suming Huang	Jan 27, 2021
GSE126151	A systematic analysis of nuclear heat-shock protein 90 identifies a metazoan-specific regulatory module	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	20	BED TXT SRA Run Selector	Barbara Hummel	Nov 08, 2019
GSE127247	Control of noncoding RNA production and histone levels by a 5’ tRNA fragment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	48	BED XLSX SRA Run Selector	Mike Levine	Jan 17, 2020
GSE129229	TNF promotes SREBP activity to regulate macrophage polarization and tissue repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	46	BED CSV	Sungho Park	Apr 03, 2019
GSE134798	Nucleosomes protect DNA from irradiation-induced double strand breaks in living cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other	Homo sapiens Mus musculus	34	BED BEDGRAPH NARROWPEAK	Jose Manuel Garcia-Manteiga	Jul 07, 2020
GSE138191	Genome-wide chromatin analyses and RNA-seq of liver cells upon YAP induction	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	83	BED BW TXT	stefano campaner	Jul 25, 2022
GSE139117	Analysis of CRE-mediated chromatin interactions by CAPTURE2.0	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	105	BED BW WIG	Jian Xu	Feb 20, 2020
GSE139420	In situ capture of global transcription dynamics and enhancer activity with high accuracy and sensitivity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	78	BED BIGWIG XLS SRA Run Selector	Ruitu Lyu	Feb 15, 2020
GSE139950	Chromatin-accessibility estimation from single-cell ATAC data with scOpen	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	12	BED MTX TSV SRA Run Selector	Zhijian Li	Sep 17, 2021
GSE144014	RNA-seq and ChIP-seq studies identify multiple pathways relevant for T cell-mediated tumor immunity regulated by SOX4.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED BW CSV	Archis Bagati	Jan 01, 2021
GSE148695	SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	148	BED BW MTX TSV	Wei Gu	Oct 05, 2021
GSE149031	Che-1/AATF-induced transcriptionally active chromatin promotes cell proliferation in Multiple Myeloma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	33	BED BROADPEAK BW TSV TXT XLSX SRA Run Selector	Maurizio Fanciulli	Dec 08, 2020