GEO Browser - GEO

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61 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta
GSE106578	Nucleosome profiles for mammalian tissues [Mnase-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Tupaia belangeri Sus scrofa Mus musculus Macaca mulatta Homo sapiens	21	BW SRA Run Selector	Yumei Li	Aug 07, 2018
GSE106580	Nucleosome profiles for mammalian tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Tupaia belangeri Sus scrofa Mus musculus Macaca mulatta Homo sapiens	39	BW	Yumei Li	Aug 06, 2018
GSE162148	A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Sus scrofa Rattus norvegicus Ovis aries Oryctolagus cuniculus Mus musculus Macaca mulatta Homo sapiens Gallus gallus Felis catus Cavia porcellus Canis lupus familiaris	553	HIC TXT	jin long	Apr 20, 2021
GSE159815	The Regulatory Evolution of the Primate Fine-Motor System	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus Mus musculus Macaca mulatta	33	BIGWIG NARROWPEAK SRA Run Selector	Morgan Wirthlin	Mar 07, 2022
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Rattus norvegicus Nomascus leucogenys Mus pahari Mus musculus Mus caroli Macaca mulatta Hylobates moloch Homo sapiens	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE129034	Comparison of chromatin accessibility between human and non-human primates	Genome binding/occupancy profiling by high throughput sequencing	Pongo pygmaeus Pan troglodytes Macaca mulatta Homo sapiens Gorilla gorilla	15	BED SRA Run Selector	Gregory Crawford	Oct 11, 2019
GSE24111	Gene expression differences among primates are associated with changes in a histone epigenetic modification	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	21	TXT SRA Run Selector	Carolyn Elizabeth Cain	Feb 15, 2011
GSE54907	Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection [Dnase-seq]	Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	15	BIGWIG SRA Run Selector	Yoichiro Shibata	Feb 13, 2014
GSE54908	Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	30	BIGWIG	Yoichiro Shibata	Feb 13, 2014
GSE60269	Epigenetic modifications are associated with inter-species gene expression variation in primates	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	98	BED SRA Run Selector	Xiang Zhou	Nov 09, 2014
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Pan troglodytes Mus musculus Macaca mulatta Homo sapiens	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE67978	Epigenomic annotation of gene regulatory alterations during evolution of the primate brain	Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Mus musculus Macaca mulatta Homo sapiens	98	BEDGRAPH BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Jan 13, 2016
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Pan troglodytes Mus musculus Macaca mulatta Homo sapiens Gorilla gorilla	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE120271	RNA-seq and ChIP-seq for human-specific regulation of neural maturation identified by cross-primate transcriptomics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Pan paniscus Macaca mulatta Homo sapiens Gorilla	79	BED BEDGRAPH TXT SRA Run Selector	Fred H Gage	Sep 20, 2020
GSE123038	ATAC-seq on primate adipose tissue	Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	13	XLSX SRA Run Selector	Devjanee Swain Lenz	Jan 21, 2019
GSE130871	Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens Callithrix jacchus	49	BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Dec 20, 2019
GSE158931	Evolution of regulatory signatures in primate cortical neurons at cell-type resolution [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta	32	BW XLSX SRA Run Selector	Stella Dracheva	Oct 03, 2020
GSE158934	Evolution of regulatory signatures in primate cortical neurons at cell-type resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta	46	BW	Stella Dracheva	Oct 03, 2020
GSE192772	Molecular features driving cellular and regulatory complexity of human brain evolution [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	12	MTX RDS TXT XLSX	Genevieve Konopka	Apr 26, 2023
GSE192774	Molecular features driving cellular and regulatory complexity of human brain evolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Pan troglodytes Macaca mulatta Homo sapiens	24		Genevieve Konopka	Apr 26, 2023