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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterXenopus tropicalis
GSE240549
Molecular basis of Urostyle development [ATAC-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
3 Gayani Senevirathne Oct 01, 2024
GSE243236
Molecular basis of Urostyle development
  • Link icon Xenopus tropicalis
21 Gayani Senevirathne Oct 01, 2024
GSE226463
Pol III chromatin immunoprecipitation-sequencing (ChIP-seq) of Xenopus tropicalis blastula embryos
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
8 Emil Karaulanov Aug 29, 2024
GSE226467
5-formylcytosine is an activating epigenetic mark for RNA Pol III during zygotic reprogramming
  • Link icon Xenopus tropicalis
32 Emil Karaulanov Aug 29, 2024
GSE172395
Maternal and zygotic factors sequentially shape the tissue regionalization of chromatin landscapes in early vertebrate embryos
  • Link icon Xenopus tropicalis
26 Kitt D. Paraiso Apr 19, 2024
GSE198492
From neural border epithelium to neural crest emigration: A comprehensive single cell roadmap of the timing and regulatory logic underlying cranial and vagal neural crest emergence [ChIPseq]
  • Genome binding/occupancy profiling by high throughput sequencing
23 Anne-Hélène Monsoro-Burq Mar 29, 2024
GSE198494
A time-resolved single-cell roadmap of the logic driving anterior neural crest diversification from neural border to migration stages
35 Anne-Hélène Monsoro-Burq Mar 29, 2024
GSE198378
Histone deacetylase 1 maintains lineage integrity through histone acetylome refinement during early embryogenesis
  • Link icon Xenopus tropicalis
45 Ken Cho Mar 27, 2023
GSE197866
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [ChIP-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
20 Chuihui Hou Jan 26, 2023
GSE197867
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [ATAC-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
3 Chuihui Hou Jan 26, 2023
GSE197877
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis
67 Chuihui Hou Jan 26, 2023
GSE218515
Super-sized clustered loops anchored at transposon Helitrons in Xenopus tropicalis sperm associate with late gene expression during embryogenesis [ChIP-Seq2]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
8 Chuihui Hou Jan 26, 2023
GSE214697
DNA methylation dynamics underlie metamorphic gene regulation programs in Xenopus tadpole brain [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
2 Robert J Denver Oct 05, 2022
GSE161718
Thyroid hormone receptor α controls larval intestinal epithelial cell death by regulating the CDK1 pathway
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
12 Ryan Dale Jul 19, 2022
GSE193363
ChIP sequencing of wild-type and TRα (-/-) hindlimb with and without T3 Treatment
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
12 Ryan Dale Jul 19, 2022
GSE175662
Chromatin Accessibility Analysis Reveals Distinct Functions for HDAC and EZH2 Activities in Early Regeneration
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
35 Anneke Dixie Kakebeen May 01, 2022
GSE161600
Uncovering the mesendoderm gene regulatory network through multi-omic data integration
  • Link icon Xenopus tropicalis
19 Kitt D. Paraiso Mar 30, 2022
GSE199671
Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
11 Jessen V Bredeson Mar 30, 2022
GSE148783
Gain of gene regulatory network interconnectivity at the origin of vertebrates
75 Juan J. Tena Feb 26, 2022
GSE172076
Occupancies of tissue-specific cis-regulatory modules by Spemann-Mangold organizer-specific transcription factors for embryonic head specification
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Xenopus tropicalis
11 Aaron Zorn Apr 15, 2021