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1273 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans		TXT
GSE67650	Developmental dynamics of C. elegans dosage compensation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis briggsae Caenorhabditis elegans	146	TXT SRA Run Selector	Sevinc Ercan	Nov 09, 2015
GSE14545	Identification of transcription factor Pha-4 binding regions	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Jan 24, 2009
GSE15501	Identification of transcription factor DPY-27 binding sites	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Apr 03, 2009
GSE15535	Genome-wide identification of the occupancy of RNA polymerase II (POL II) at L4/young adult stage in C. elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15567	Identification of transcription factor DAF-16 binding sites in C. elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15625	Identification of transcription factor MAB-5 binding sites	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15628	RNA polymerase occupancy at embryonic stage and starved L1 stage in pha-4 transgenic worms	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE17284	Partitioning the C. elegans genome by nucleosome modification, occupancy, and positioning	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	5	BED TXT SRA Run Selector	Sam Guoping Gu	Aug 31, 2009
GSE17454	Identification of transcription factor CEH-14 binding sites in C.elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	3	GFF TXT SRA Run Selector	Flora Vaccarino	Jul 31, 2009
GSE17456	Identification of transcription factor EOR-1 binding sites in C.elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	GFF3 TXT SRA Run Selector	Flora Vaccarino	Jul 31, 2009
GSE17458	Identification of transcription factor HLH-8 binding sites in C.elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	GFF3 TXT SRA Run Selector	Flora Vaccarino	Jul 31, 2009
GSE23042	DNA accessibility profile of three C. elegans tissues during development	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	8	TXT	Sam Guoping Gu	Apr 16, 2011
GSE24241	seq-SDQ3891_LEM2_N2_MXemb	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	3	BED SAM TXT SRA Run Selector	Everett Zhou	Sep 21, 2010
GSE24318	seq-WA30534819_H3K4me3_N2_MXemb	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED SAM TXT SRA Run Selector	Everett Zhou	Sep 24, 2010
GSE25933	Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by genome tiling array	Caenorhabditis elegans	31	BED GFF GFF3 PAIR SAM TXT WIG	DCC modENCODE	Dec 22, 2010
GSE31602	Tissue-specific nuclei purification from animal models for genome-wide expression and chromatin profiling.	Expression profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	18	BAM BEDGRAPH GFF PAIR PDF TXT WIG SRA Run Selector	Jorja Henikoff	Dec 05, 2011
GSE35276	Identification of Transcription Factor GEI-11::GFP Binding Regions in L3	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BEDGRAPH GFF3 TXT SRA Run Selector	DCC modENCODE	Jan 31, 2012
GSE35277	Identification of Transcription Factor CES1::GFP Binding Regions in L3	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BEDGRAPH GFF3 TXT SRA Run Selector	DCC modENCODE	Jan 31, 2012
GSE35868	Identification of Transcription Factor FOS-1::GFP Binding Regions in L1	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BEDGRAPH GFF3 TXT SRA Run Selector	DCC modENCODE	Feb 16, 2012
GSE40944	Identification of Transcription Factor EOR-1::POL-2 Binding Regions in L3	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	GFF3 TXT WIG SRA Run Selector	DCC modENCODE	Sep 18, 2012