39 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterSolanum lycopersicum
GSE269996
Histone demethylase JMJ4 interacts with transcription factor BLH3 to modulate jasmonate biosynthesis in tomato response to cold stress [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
15 Chenxu Liu Aug 27, 2024
GSE243908
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
9 Xiaoning HE Aug 05, 2024
GSE243911
THE EPIGENOME PLAYS A MAJOR ROLE IN TOMATO 3D CHROMATIN ORGANIZATION
  • Link icon Solanum lycopersicum
17 Xiaoning HE Aug 05, 2024
GSE245525
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
28 Jing An Jul 11, 2024
GSE245529
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac
  • Link icon Solanum lycopersicum
43 Jing An Jul 11, 2024
GSE264429
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ATAC-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Jing An Jul 11, 2024
GSE264430
KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac [ChIP-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
Jing An Jul 11, 2024
GSE233265
Evolutional heterochromatin condensation delineates chromocenter formation and retrotransposon constraint in plants
  • Genome binding/occupancy profiling by high throughput sequencing
50 Weifeng Zhang Jun 22, 2024
GSE243804
aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs [ChIP-Seq]
  • Genome binding/occupancy profiling by high throughput sequencing
152 Wenying Zhong Apr 28, 2024
GSE243806
aChIP: efficient, sensitive, robust ChIP-seq for economically important plant organs
160 Wenying Zhong Apr 28, 2024
GSE254893
Combined analysis of ATAC-Seq and RNA-Seq reveal a potential role of WRKY34 in tomato response to cold stress [ATAC]
  • Genome binding/occupancy profiling by high throughput sequencing
8 Mingyue Guo Feb 23, 2024
GSE196887
Histone code dynamics during nitrogen response in tomato
  • Link icon Solanum lycopersicum
84 Ryan Patrick Nov 08, 2023
GSE171493
Comprehensive characterization of cistrome and epicistrome involved in fruit ripening [pre-experiment]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
24 Yu Ma Jun 30, 2023
GSE172249
Comprehensive characterization of cistrome and epicistrome involved in fruit ripening [green fruit]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
393 Yu Ma Jun 30, 2023
GSE172260
Comprehensive characterization of cistrome and epicistrome involved in fruit ripening [red fruit]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
393 Yu Ma Jun 30, 2023
GSE173208
Comprehensive characterization of cistrome and epicistrome involved in fruit ripening [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
12 Yu Ma Jun 30, 2023
GSE173213
Comprehensive characterization of cistrome and epicistrome involved in fruit ripening
  • Link icon Solanum lycopersicum
824 Yu Ma Jun 30, 2023
GSE202902
SlWRKY33 confers cold tolerance through activation of various downstream signaling pathways in cultivated tomato
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
4 Mingyue Guo Feb 07, 2023
GSE206355
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [ATAC-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
6 Jing An Jan 03, 2023
GSE206358
HSFA1a controls plant heat stress response through its action on the 3D chromatin reorganization of enhancer-promoter interactions [ChIP-seq]
  • Genome binding/occupancy profiling by high throughput sequencing
  • Link icon Solanum lycopersicum
32 Jing An Jan 03, 2023