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857 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TSV
GSE222454	Multimodal profiling reveals site-specific adaptation and tissue residency hallmarks of γδ T cells across organs in mice	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	CSV H5 MTX TSV	Sagar -	Nov 05, 2023
GSE237830	Flexible and scalable control of T cell memory by a reversible epigenetic switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW H5 MTX TSV TXT	Kathleen Abadie	Jul 25, 2023
GSE93431	Two independent modes of chromosome organization are revealed by cohesin removal	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	32	BW CSV HDF5 NARROWPEAK TSV TXT SRA Run Selector	Nezar Abdennur	Jun 10, 2017
GSE236667	Thymic mimetic cells function beyond self-tolerance [scATAC-Seq Multiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	MTX TSV	Jakub Abramson	Aug 28, 2023
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023
GSE205368	s3-ATAC landscape of GEMM AML-derived CD8 T cells treated in vivo with JQ1 or vehicle	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BAM TSV	Andrew Adey	Jun 05, 2022
GSE141825	Single-cell ATAC-seq of mouse thymus iNKT cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED CSV H5 MTX TBI TSV SRA Run Selector	Indra Adrianto	Jun 27, 2023
GSE175684	HyDrop: droplet-based scATAC-seq and scRNA-seq using dissolvable hydrogel beads	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	20	BW TAR TSV SRA Run Selector	Stein Aerts	Jun 04, 2021
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE121589	Dissecting the Individual and Collective Regenerative Behavior of Muscle Stem Cells During Aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	90	BIGWIG NARROWPEAK TAGALIGN TSV TXT SRA Run Selector	Carlos Aguilar	Aug 30, 2019
GSE214046	Three-dimensional chromatin re-organization during muscle stem cell aging [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TBI TSV	Carlos Andres Aguilar	Feb 02, 2023
GSE214047	Three-dimensional chromatin re-organization during muscle stem cell aging	Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TBI TSV TXT	Carlos Andres Aguilar	Feb 02, 2023
GSE262348	NEMO Knockout Drives Variations in Gene Expression Regenerative Trajectory and Induces Chromatin Remodeling in murine muscle satellite cells during healing from traumatic injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BIGWIG NARROWPEAK TSV TXT	Carlos Aguilar	Apr 01, 2024
GSE229513	Symmetry breaking in gastruloid development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BIGWIG H5 MTX RDS RTF TBI TSV TXT	Nadim Aizarani	Apr 29, 2023
GSE138981	Analysis of NSL knockout brains	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	85	BW TSV TXT SRA Run Selector	Asifa Akhtar	Mar 31, 2020
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE152449	Viral manipulation of functionally distinct interneurons in mice, non-human primates and humans	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	CSV TSV SRA Run Selector	Kathryn Allaway	Aug 10, 2020