GEO Browser - GEO

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130 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TAR
GSE277927	Transcriptional repression by HDAC3 mediates T cell exclusion from Kras mutant lung tumors [H3K9Ac ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH TAR TXT	Lillian J Eichner	Oct 10, 2024
GSE272483	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Third-party reanalysis	Mus musculus	54	BW NARROWPEAK TAR	Lucille Lopez-Delisle	Jul 18, 2024
GSE271760	Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	88	TAR	Pedro P Rocha	Aug 06, 2024
GSE266424	IRF8 defines the epigenetic landscape in postnatal microglia, thereby directing their transcriptome programs - additional datasets	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	39	H5 NARROWPEAK TAB TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE266423	Single-cell transcriptome profiles of wild-type and IRF8KO microglia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	H5 TAR TBI TSV	Keita Saeki	Jul 01, 2024
GSE263333	Spatial-Mux-seq: Multiplexed spatial mapping of chromatin features, transcriptome, and proteins at tissue scale	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	TAR TSV	Liran Mao	Oct 22, 2024
GSE259285	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch2]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TAR TSV	Chen Weng	Feb 26, 2024
GSE259284	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Crispr_Mouse_Batch1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TAR TSV TXT	Chen Weng	Feb 26, 2024
GSE254090	A cell type-aware framework for nominating non-coding variants in Mendelian regulatory disorders	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	87	BIGWIG BW RESULTS TAR	Elizabeth C Engle	Aug 06, 2024
GSE254085	Noncoding Mendelian epigenomics - single cell multiome mouse cMN data	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BIGWIG TAR	Elizabeth C Engle	Aug 06, 2024
GSE253954	Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	17	RDS TAR	Michael Leone	Aug 01, 2024
GSE247511	Cadherins modulate the self-organizing potential of gastruloids	Expression profiling by high throughput sequencing Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	83	BW LOOM NARROWPEAK TAR	ALEXANDRE MAYRAN	Jul 18, 2024
GSE244536	Deterministic reprogramming of neutrophils in tumors	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	35	MTX TAR TSV TXT	Melissa Ng	Jan 11, 2024
GSE242067	Genome access is transcription factor specific and defined by nucleosome position	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	131	BW TAR TXT	Dirk Schuebeler	Aug 13, 2024
GSE239603	APOE4 impairs the microglial response in Alzheimer's disease by inducing TGFbeta-mediated checkpoints	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	274	BW TAR	Rayk Behrendt	Jul 31, 2023
GSE238150	Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	TAR	Jun Hyung Sin	Oct 25, 2023
GSE238149	Ikaros is a principal regulator of Aire+ mTEC homeostasis, thymic mimetic cell diversity, and central tolerance [Ikaros scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TAR	Jun Hyung Sin	Oct 25, 2023
GSE234783	Functional identification of protocadherin alpha 9 (PCDHA9) as a candidate causative gene for amyotrophic lateral sclerosis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	4	TAR	Dan Zhang	Jun 30, 2023
GSE232926	The primitive endoderm supports lineage plasticity to enable regulative development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	47	BED BW TAR	Josh M Brickman	Jun 25, 2024
GSE232482	Comparative single-cell analyses identify shared and divergent features of human and mouse kidney development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	H5 TAR	Andrew P McMahon	Jun 20, 2024