GEO Browser - GEO

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130 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TAR
GSE175684	HyDrop: droplet-based scATAC-seq and scRNA-seq using dissolvable hydrogel beads	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens Mus musculus	20	BW TAR TSV SRA Run Selector	Stein Aerts	Jun 04, 2021
GSE155677	Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Escherichia coli Mus musculus	36	BED BEDGRAPH BW FA MTX PICKLE TAR TSV TXT SRA Run Selector	Boyan Bonev	Jan 27, 2022
GSE80105	Synergistic model of chromatin predicts Dnase-I accessibility	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TAR TSV TXT SRA Run Selector	David Gifford	Jul 20, 2016
GSE117309	High-throughput single-cell ChIP-seq identifies heterogeneity of chromatin states in breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	FASTA TAR TXT SRA Run Selector	Kevin Grosselin	Apr 12, 2019
GSE141813	Combined mutation of C/EBPa and GATA-2 induce bi-lineage acute erythroid leukemia through transformation of a neomorphic neutrophil-erythroid progenitor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	74	TAR	Cristina Di Genua	Feb 24, 2020
GSE156707	Sex-specific control of human heart maturation by the progesterone receptor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	85	TAR	Enzo Porrello	Mar 22, 2021
GSE167552	The stress response regulator HSF1 modulates natural killer cell anti-tumour immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	BED BW TAR TSV	Kathryn Grace Hockemeyer	Feb 26, 2021
GSE171220	Hematopoiesis under telomeric attrition at the single-cell resolution [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	4	TAR SRA Run Selector	Feiyang Ma	Oct 23, 2021
GSE171943	Spatial profiling of chromatin accessibility in mouse and human tissues	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	TAR TSV SRA Run Selector	Yanxiang Deng	May 20, 2022
GSE179043	Transcriptional programs dictating Schwann cell transformation in MPNST	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	50	CSV H5 TAR TBI TSV TXT	Lai Man (Natalie) Wu	Nov 07, 2022
GSE192575	Acquired semi-squamalization during chemotherapy suggests a differentiation therapy for bladder cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	42	CSV GAPPEDPEAK TAR	Xaingyu Pan	Jul 09, 2022
GSE205055	Spatial epigenome-transcriptome co-profiling of mammalian tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	22	TAR TSV	Di Zhang	Jan 29, 2023
GSE212482	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	26	BED MTX TAR TSV	Michael Januszyk	Oct 21, 2022
GSE212707	Multiomic analysis reveals conservation of cancer associated fibroblast phenotypes across species and tissue of origin [multiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	21	TAR	Michael Januszyk	Oct 21, 2022
GSE216325	Characterization of human pluripotent stem cell differentiation by single-cell dual-omics analyses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	25	BED TAR TXT	Xiaoping Han	Oct 28, 2022
GSE218274	PAX3-FOXO1 expression in endothelial progenitors dictates myogenic reprogramming and rhabdomyosarcoma identity	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	75	BED BW HIC TAR TDF TXT	Hongjian Jin	Sep 29, 2023
GSE219015	Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	H5 RDS TAR TSV TXT	Chen Weng	Nov 18, 2023
GSE232482	Comparative single-cell analyses identify shared and divergent features of human and mouse kidney development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	H5 TAR	Andrew P McMahon	Jun 20, 2024
GSE239603	APOE4 impairs the microglial response in Alzheimer's disease by inducing TGFbeta-mediated checkpoints	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	274	BW TAR	Rayk Behrendt	Jul 31, 2023
GSE253954	Conserved dorsal horn neuron subtype-specific enhancers are implicated in the genetic risk of chronic pain.	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	17	RDS TAR	Michael Leone	Aug 01, 2024