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71 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		RDS
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE156245	Map3k2-regulated intestinal stromal cells define a distinct intestine stem cell niche for tissue repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BW MTX RDS TSV XLSX SRA Run Selector	Hongxiang Sun	Aug 15, 2020
GSE157079	Single cell resolution regulatory landscape of the mouse kidney highlights cellular differentiation programs and renal disease targets	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BIGWIG CSV RDS TXT SRA Run Selector	Katalin Susztak	Aug 29, 2020
GSE161808	NRF1 Association with AUTS2-Polycomb Mediates Specific Gene Activation in the Brain	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BIGWIG BW NARROWPEAK RDS TXT SRA Run Selector	sanxiong liu	Oct 11, 2021
GSE167232	Integration of M. tuberculosis phenotype with single cell RNA-seq to interrogate host macrophage heterogeneity in vivo.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	24	CSV RDS TSV SRA Run Selector	Davide Pisu	Apr 28, 2021
GSE167381	LKB1 inactivation initiates a chromatin remodeling cascade to drive metastatic progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	441	BW CSV RDS TSV TXT XLSX ZIP SRA Run Selector	Jeffrey Michael Granja	Apr 30, 2021
GSE173673	Transcriptional regulation of cell fate decisions in early B cell activation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BW H5 RDS TXT SRA Run Selector	Maria Fischer	Aug 30, 2021
GSE178707	NEAT-seq: Simultaneous profiling of intra-nuclear proteins, chromatin accessibility, and gene expression in single cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	13	CSV H5 MTX RDS TSV SRA Run Selector	Amy Chen	Feb 27, 2022
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183765	BlCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	118	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE183766	CaBl: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	171	BED BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE187332	Decay of heterochromatin domains at selective gene loci in aging mouse brain cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	59	RDS TXT SRA Run Selector	Bing Ren	Sep 13, 2022
GSE189502	Mutant-SETBP1 activates transcription of Myc programs to accelerate CSF3R-driven myeloproliferative neoplasms	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	56	BED BW CSV RDS TSV TXT	Sarah Ann Carratt	May 11, 2022
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE196990	Durable Alterations of Hematopoiesis and Chromatin post-COVID-19	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	189	H5 RDS TXT	Jin-Gyu Cheong	Feb 15, 2023
GSE197289	Human and mouse trigeminal ganglia cell atlas implicates multiple cell types in migraine	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	36	CSV RDS	Lite Yang	Feb 26, 2022
GSE199499	Single-cell chromatin accessibility profiling reveals a self-renewing muscle satellite cell state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	ARROW FPKM_TRACKING RDS	Yarui Diao	Jun 18, 2023
GSE201402	mouse retina 10x Genomics Multiome ATAC+RNA data	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	RDS	Katy Rezvani	May 02, 2022
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150	BIGWIG BW MTX NARROWPEAK RDS TSV TXT	Bernard Klaas van der Veer	Apr 12, 2023
GSE215824	Alveolar epithelial progenitor cells drive lung regeneration via dynamic changes in chromatin topology modulated by lineage-specific Nkx2-1 activity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	ARROW LOOM RDS	William Zacharias	Oct 19, 2022