GEO Browser - GEO

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625 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		CSV
GSE199739	NuRD complex recruitment to Thpok mediates CD4+ T cell lineage differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BAI CSV H5 TBI TSV	Remy Bosselut	Jun 10, 2022
GSE21717	ATAC and Mediator coactivators form a stable complex and regulates a set of non-coding RNA genes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED CSV SRA Run Selector	Laszlo Tora	Jun 25, 2010
GSE43988	The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	9	BED CSV RPKM	Dimple Chakravarty	Dec 01, 2014
GSE46792	An epigenetic signature of developmental potential in neural stem cells and early neurons [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED CSV SRA Run Selector	Matt Burney	Jun 09, 2013
GSE46793	An epigenetic signature of developmental potential in neural stem cells and early neurons	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED CSV	Matt Burney	Jun 09, 2013
GSE52628	Genome-wide map of H3K4me3 in 12 day post-partum mouse spermatocytes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BEDGRAPH CSV TXT SRA Run Selector	Christopher Lee Baker	Feb 24, 2014
GSE60440	DMRT6 coordinates the transition between mitotic and meiotic developmental programs during mamalian spermatogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV SRA Run Selector	Micah Gearhart	Oct 31, 2014
GSE66286	Chromatin Response to UV Damage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED CSV TXT SRA Run Selector	Vijay K Tiwari	Oct 10, 2015
GSE66364	PML protein organizes heterochromatin domains where it regulates histone H3.3 deposition by ATRX/DAXX	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED BW CSV SRA Run Selector	Philippe Collas	Mar 06, 2017
GSE70413	Pitx2 promotes heart repair by transcriptionally activating the antioxidant response after cardiac injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED BEDGRAPH CSV SRA Run Selector	Min Zhang	May 19, 2016
GSE77999	Genome-wide distribution of H2AS40Gc in mouse embryonic stem cells.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED CSV WIG SRA Run Selector	Koji Hayakawa	Feb 02, 2020
GSE81255	Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	67	BED BROADPEAK BW CSV SRA Run Selector	William Greenleaf	May 10, 2016
GSE81256	Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BW CSV SRA Run Selector	William Greenleaf	May 10, 2016
GSE84899	Cdx and T Brachyury co-activate growth signaling in the embryonic axial progenitor niche.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	55	BED BW CSV WIG SRA Run Selector	Jacqueline Deschamps	Dec 20, 2016
GSE87424	Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	167	BED CSV IDAT TXT XLSX	Gary L Johnson	Jan 20, 2017
GSE89405	Early transcriptional and epigenetic regulation of CD8+ T cell differentiation revealed by single-cell RNA-seq	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	304	BED CSV SRA Run Selector	Gene Yeo	Feb 20, 2017
GSE89960	An environment-dependent transcriptional network regulates human microglia phenotypes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	41	BED CSV SRA Run Selector	Dylan Derik Skola	May 25, 2017
GSE93127	Comprehensive characterization of neutrophil genome topology	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	51	BED BEDGRAPH CSV TXT SRA Run Selector	Yina Zhu	Feb 06, 2017
GSE94698	Kinetics of RNA polymerase 2 recruitment and H3K36me3 deposition after stimulation of murine T-cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BEDGRAPH CSV SRA Run Selector	Franziska Greulich	Mar 31, 2017
GSE97535	ATAC sequencing of developing cone photoreceptors	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED CSV SRA Run Selector	Botond Roska	Nov 07, 2017