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1162 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE62151	Upstream Anti-sense Promoters Act as Local Enhancers of Mammalian Protein-coding Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	17	BEDGRAPH BW WIG SRA Run Selector	Karen Adelman	Jun 23, 2015
GSE85191	Widespread transcriptional pausing and elongation control at enhancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Mus musculus	37	BEDGRAPH BW SRA Run Selector	Karen Adelman	Mar 09, 2018
GSE115929	PAD2-mediated citrullination contributes to efficient oligodendrocyte differentiation and myelination	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH SRA Run Selector	Eneritz Agirre	Apr 23, 2019
GSE73143	Differential Peak Calling of ChIP-Seq Signals with Replicates with THOR	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED BEDGRAPH SRA Run Selector	Manuel Allhoff	Aug 03, 2016
GSE130224	The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Genome variation profiling by high throughput sequencing	Mus musculus	133	BED BEDGRAPH BEDPE BW HIC TXT	Frederick W Alt	Aug 19, 2019
GSE130270	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	149	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	Sep 25, 2019
GSE142781	CTCF orchestrates long-range cohesin-driven V(D)J recombinational scanning	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	170	BEDGRAPH BROADPEAK BW TXT	Frederick W Alt	May 11, 2020
GSE151910	Loop Extrusion Mediates Physiological Locus Contraction for V(D)J Recombination	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	138	BEDGRAPH BW TXT XLS	Frederick W Alt	Nov 07, 2020
GSE119727	H3K4me3 ChIP-seq from B6CASTF1-PRDM9 Humanized/CAST testes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED BEDGRAPH TXT SRA Run Selector	Nicolas Altemose	Sep 28, 2018
GSE83833	Genome-wide characterization of histone mark co-occurrence at single molecule resolution	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	310	BEDGRAPH BIGWIG SRA Run Selector	Ido Amit	Jul 13, 2016
GSE212995	Systematic mapping of 3D enhancer interactions reveals lineage specific regulatory networks during early mouse developmental decisions [Hi-C]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED BEDGRAPH TXT	Effie Apostolou	Aug 21, 2023
GSE104046	The Co-operation of RUNX1 with LDB1, CDK9 and BRD4 Drives Transcription Factor Complex Relocation During Haematopoietic Specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32	BEDGRAPH BW	Salam Adli Assi	Jul 19, 2018
GSE222058	Spic regulates one-carbon metabolism and histone methylation in ground-state pluripotency	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BEDGRAPH BW	Yaser Atlasi	Sep 06, 2023
GSE112320	Comprehensive analysis of H3K9me2 oocytes, together with DNA methylation and expression analysis of G9a conditional KO oocytes and maternal KO preimplantation embryos	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	31	BEDGRAPH TXT SRA Run Selector	Wan Kin Au Yeung	Apr 02, 2019
GSE128960	Genome-wide mapping of HA-tagged Rev-Erba in mice Brown Adipose Tissue (BAT) after one week at thermoneutrality (29C) or exposed to chronic cold (4C)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BEDGRAPH TXT SRA Run Selector	Yann Aubert	Aug 27, 2019
GSE120868	Genome wide mapping of chromatin accessibility in Treg cells at steady state	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDGRAPH SRA Run Selector	Dorina Avram	Aug 07, 2019
GSE120873	Mapping Bcl11b binding in regulatory T cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH SRA Run Selector	Dorina Avram	Aug 07, 2019
GSE120875	Genome wide mapping in regulatory T cells at steady state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BEDGRAPH	Dorina Avram	Aug 07, 2019
GSE145779	Bcl11b binding and transcriptome analysis of Bcl11b-deficient MAIT cells at steady state and infection	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BEDGRAPH	Dorina Avram	Mar 22, 2021