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3996 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BED
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE151011	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BROADPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE218881	Nanowell-based single-cell combinatorial indexed ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	ARROW BED SRA Run Selector	Andrew Adey	Feb 08, 2023
GSE101546	SETDB1 controls T helper cell lineage integrity by repressing endogenous retroviruses	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BED BROADPEAK TXT SRA Run Selector	Veronique Adoue	Feb 05, 2019
GSE141825	Single-cell ATAC-seq of mouse thymus iNKT cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED CSV H5 MTX TBI TSV SRA Run Selector	Indra Adrianto	Jun 27, 2023
GSE130384	Cdk5-mediated phosphorylation ensures robust neuronal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED BW XLSX SRA Run Selector	Swarnaseetha Adusumalli	Nov 29, 2019
GSE61432	Phospho-HLXB9 binding sites in mouse insulinoma cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED SRA Run Selector	Sunita Agarwal	Sep 30, 2015
GSE99798	Meg3 binding sites in mouse insulinoma cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED SRA Run Selector	Sunita K Agarwal	Sep 20, 2017
GSE115929	PAD2-mediated citrullination contributes to efficient oligodendrocyte differentiation and myelination	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED BEDGRAPH SRA Run Selector	Eneritz Agirre	Apr 23, 2019
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE165444	ZFP281 ChIP-sequencing of MMTV-Neu early lesion (EL) and primary tumor (PT) spheres	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED SRA Run Selector	Julio Aguirre-Ghiso	Jan 26, 2021
GSE186584	Epigenetic dysregulation from chromosomal transit in micronuclei [4T1 MN ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW SRA Run Selector	Albert S Agustinus	Mar 13, 2023
GSE186589	Epigenetic dysregulation from chromosomal transit in micronuclei	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	187	BED BIGWIG BW TDF TXT	Albert S Agustinus	Mar 13, 2023
GSE214448	Epigenetic dysregulation from chromosomal transit in micronuclei [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BED BW TDF	Albert S Agustinus	Mar 13, 2023
GSE225615	Single-cell multiomic analysis identifies macrophage subpopulations in promoting cardiac repair	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	48	BED BW	fu Ai	Sep 06, 2024
GSE90707	NFAT1 binding genome-wide in memory-like CTLs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED SRA Run Selector	Tarmo Äijö	May 23, 2017
GSE124008	A reference map of cardiac transcription factor chromatin occupancy identifies dynamic and conserved transcriptional enhancers	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	45	BED BW TXT SRA Run Selector	Brynn Nicole-Yoshiko Akerberg	Sep 13, 2019
GSE107151	Genome-wide maps of chromatin state in HSC, HPC7 and lineage-committed cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BIGWIG SRA Run Selector	Asifa Akhtar	Mar 13, 2020
GSE107154	Decoding the regulatory circuit by epigenetic regulator MOF in haematopoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	68	BED BIGWIG CSV TXT	Asifa Akhtar	Mar 13, 2020