GEO Browser - GEO

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4012 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BED
GSE11431	Mapping of transcription factor binding sites in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED TXT SRA Run Selector	Chia-Lin Wei	Jun 12, 2008
GSE12346	Priming for Th2 differentiation requires IL-2-mediated induction of IL-4 receptor alpha chain expression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED	Dustin E Schones	Dec 11, 2008
GSE13511	Genome-wide profiling of PPARγ:RXR and RNA polymerase II	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED WIG XLS SRA Run Selector	H.G. Stunnenberg	Dec 10, 2008
GSE14254	Global Mapping of Histone H3 K4 and K27 Trimethylation: Lineage Fate Determination of Differentiating CD4+ T Cells	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED SRA Run Selector	Weiqun Peng	Jan 21, 2009
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE15814	High resolution analysis of epigenetic changes associated with X inactivation, ChIP-Seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED WIG SRA Run Selector	H.G. Stunnenberg	Jun 06, 2009
GSE15844	Genome-wide mapping of Nuclear Factor I binding sites using ChIP-Seq in WT and NFI-C knock-out MEFs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED SGA TXT WIG SRA Run Selector	Milos Pjanic	Apr 24, 2010
GSE15884	High resolution analysis of epigenetic changes associated with X inactivation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array	Mus musculus	58	BED GFF TXT WIG	H.G. Stunnenberg	Jun 06, 2009
GSE15896	Genome wide uH2A localization analysis highlights Bmi1-dependent deposition of the mark at repressed genes.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED TXT SRA Run Selector	Raja Jothi	May 20, 2009
GSE15909	Gene expression and UH2A ChIP-Seq binding analysis in Bmi1 knock-out and wild type MEFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CEL CHP TXT	Raja Jothi	May 20, 2009
GSE16723	Bcl6 and NFkB cistromes mediate opposing reulation of the innate immune response	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED BEDGRAPH TXT SRA Run Selector	Ruth T Yu	Nov 24, 2010
GSE17067	A quantitative model of transcription regulation reveals the role of non-conserved enhancers	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED CEL GPR TXT SRA Run Selector	Kenzie MacIsaac	May 13, 2010
GSE17642	Genome-wide mapping of Eset-binding sites and H3K9me3 state in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	3	BED TXT SRA Run Selector	Mikael Huss	Nov 04, 2009
GSE18125	Epigenetic regulation of Bmp2 and Smad6 in Ras-induced senescence	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	10	BED CEL SRA Run Selector	Atsushi Kaneda	Dec 22, 2011
GSE18515	Genome-wide map of lysine specific demethylase 1 (LSD1) in mouse embryonic stem cells.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED SRA Run Selector	Venugopalan Nair	Oct 03, 2012
GSE18776	Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED SRA Run Selector	Anton Valouev	Dec 24, 2009
GSE18829	Discovering Hematopoietic Mechanisms Through Genome-Wide Analysis of GATA Factor Chromatin Occupancy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	11	BED TXT	Emery H. Bresnick	Nov 25, 2009
GSE18963	Distribution of macroH2A1 nucleosomes in mouse liver chromatin	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED GRAPH TXT SRA Run Selector	John Pehrson	Nov 10, 2010
GSE19019	Genome-wide mapping of Nr5a2 in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED TXT SRA Run Selector	Mikael Huss	Jan 22, 2010
GSE19219	Genome-wide maps of Tbx3 binding sites in mouse ESCs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED SRA Run Selector	Yuriy L Orlov	Dec 04, 2009