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13571 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus
GSE160313	In vivo CRISPR screening reveals nutrient signaling processes underpinning CD8+ T cell fate decisions [Pofut1 ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Hongbo Chi	Feb 25, 2021
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE217745	Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW	Xiangzheng Liu	Nov 01, 2023
GSE242201	DNA methylation shapes the Polycomb landscape during the exit from naive pluripotency	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	39	BW	Julien Richard Albert	Jul 16, 2024
GSE75547	Determine the effects of Hdac3 deletion on H3K27ac profiles in murine chondrocytes[ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Jennifer Jane Westendorf	Aug 10, 2016
GSE98427	Epigenetic activation during Th17 cell differentiation is impaired after TRIM28 deletion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF TXT WIG SRA Run Selector	Huiping Lu	Feb 22, 2018
GSE229127	H3.3B controls aortic dissection progression by regulating vascular smooth muscle cells phenotypic transition and vascular inflammation.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW	li wang	Apr 06, 2024
GSE99154	H3K36me3 protects the mouse epigenome from single nucleotide variations [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Jin Sun	Aug 01, 2019
GSE202319	Mechanotransduction mediated by cyclical respiratory motion maintains lung alveolar epithelial cell fate	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	H5	Michael Patrick Morley	May 01, 2024
GSE230233	Pre-Hypertrophic Chondrogenic Enhancer Landscape of Limb and Axial Skeleton Development [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BW	Guillaume Andrey	May 11, 2023
GSE230234	Pre-Hypertrophic Chondrogenic Enhancer Landscape of Limb and Axial Skeleton Development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW NARROWPEAK	Guillaume Andrey	May 11, 2023
GSE244758	The Transcription factor NF-YA is Crucial for Neural Progenitor Maintenance during Brain Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH NARROWPEAK	Tomoyuki Yamanaka	Jan 11, 2024
GSE243020	The loss of an orphan nuclear receptor NR2E3 augments Wnt/β-Catenin signaling via epigenetic dysregulation that promotes the Sp1-β catenin-p300 interactions in hepatocellular carcinoma.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TXT	Kyounghyun Kim	Aug 26, 2024
GSE164906	"Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis Genome variation profiling by high throughput sequencing	Mus musculus	476	BW TAB VCF	Yongbing Zhao	Jul 21, 2022
GSE222057	(ATAC-seq_and_ChIP-seq) Spic regulates one-carbon metabolism and histone methylation in ground-state pluripotency	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW TXT XLSX	Yaser Atlasi	Sep 06, 2023
GSE69180	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH TXT	Mark B Meyer	Jun 03, 2015
GSE69179	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH SRA Run Selector	Mark B Meyer	Jun 03, 2015
GSE237938	10X Multiome AKSP	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	MTX TSV	BiNGS Core	Oct 17, 2024
GSE118440	2-hydroxyglutarate inhibits transcription factor mediated differentiation by preventing H3K9 demethylation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BW SRA Run Selector	Richard Koche	Jun 10, 2019
GSE96591	2.5 dpc Uterus Chip-Seq of Kdm4a mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	WIG SRA Run Selector	Aditya Sankar	Aug 17, 2017