GEO Browser - GEO

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69 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		XLSX
GSE223878	RREB1 Regulates Neuronal Proteostasis and Microtubule Network Function [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	XLSX	Susan Ackerman	Jan 01, 2024
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023
GSE239962	Overactivation of ATP citrate lyase-H3K27 acetylation axis leads to maternal diabetes induced neural tube defect [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	XLSX	Baoling Bai	Aug 31, 2023
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE154937	ChIP-seq analysis to identify transcriptional targets of BMAL1 mammary epithelial cells in culture, and determine if targets of BMAL1 changed upon lactogen induced differentiation of mammary epithelial cells in culture	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	XLSX SRA Run Selector	Theresa M Casey	Jul 22, 2021
GSE215813	OBOX regulates murine zygotic genome activation and early development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	135	BW XLSX	Fengling Chen	Apr 24, 2023
GSE212213	Multi-omics Analyses Reveal Sex Differences in Mouse Renal Proximal Tubules	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	TXT XLSX	Lihe Chen	Nov 21, 2022
GSE141325	RNA-seq and ATAC-seq of liver samples in Mettl3 flox/flox and hepatocyte-specific Mettl3 knockout (HKO) mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	XLSX	Zheng Chen	Oct 29, 2021
GSE168945	Assay for transposase-accessible chromatin-sequencing (ATAC-seq) of liver samples in Wtapflox/flox and hepatocyte-specific Wtap knockout (Wtap-HKO) mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	XLSX SRA Run Selector	Zheng Chen	Jun 02, 2022
GSE198023	WTAP regulates gene expression by binding to the promoters in primary hepatocytes.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	XLSX	Zheng Chen	Jun 02, 2022
GSE227173	Assay for transposase-accessible chromatin-sequencing (ATAC-seq) of heart samples from Wtapflox/flox and Wtap-CKO mice, respectively.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	XLSX	Zheng Chen	Jan 14, 2024
GSE179210	Genome-wide CRISPR screen reveals a key role for integrin avb3 in TH2 cell polarisation.	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	33	BED XLSX	Alastair Crisp	Nov 02, 2022
GSE211941	CDCA7-associated global aberrant DNA hypomethylation translates to localized, tissue-specific transcriptional responses [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BW XLSX	Lucia Daxinger	Feb 09, 2024
GSE211943	CDCA7-associated global aberrant DNA hypomethylation translates to localized, tissue-specific transcriptional responses [H3K4me3_brain]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX	Lucia Daxinger	Feb 09, 2024
GSE211947	CDCA7-associated global aberrantDNA hypomethylation translates to localized, tissue-specific transcriptional responses [H3K9me3_H3K27me3_Spleen]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW XLSX	Lucia Daxinger	Feb 09, 2024
GSE221710	A genome-wide screen reveals new regulators of the 2-cell-like cell state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	48	BW TXT XLSX	Pierre-Antoine Defossez	Mar 10, 2023
GSE245253	Function of ARID1A during osteoclastogenesis (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	XLS XLSX	Jiahui Du	Jun 23, 2024
GSE194003	Characterization of the crosstalk between Notch signaling and hypoxia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BW XLSX	Tobias Friedrich	Jul 07, 2022
GSE181420	Chromatin accessibility underlies cell-type specific programs of amphetamine-regulated gene expression in Nucleus Accumbens interneurons [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	37	BW XLSX SRA Run Selector	David Gallegos	Aug 06, 2021