GEO Browser - GEO

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440 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TSV
GSE214264	3D genome structures of single differentiating mouse ES cells reveal a unique reorganisation of chromatin in the formative state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	101	BROADPEAK BW CSV NARROWPEAK NCC TSV TXT	David Lando	Jan 19, 2024
GSE183764	9sCa: MSL2 is an allelic dosage sensor in mammals	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	244	BED BEDPE BW RDATA RDS TSV TXT SRA Run Selector	Asifa Akhtar	Aug 10, 2023
GSE225554	A Cellular Atlas of the Down Syndrome Brain Identifies Accelerated Oligodendrocyte Precursor Cell Senescence	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	H5 MTX TBI TSV	Brian Kalish	Sep 14, 2023
GSE213020	A Cre-deleter specific for embryo-derived brain macrophages reveals distinct features of microglia and border macrophages	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	H5 TSV	Julia Belk	Feb 02, 2023
GSE212002	A Critical Role of RUNX1 in Governing Megakaryocyte-Primed Hematopoietic Stem Cell Differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	120	BW MTX TSV TXT	Chen Wang	Jan 20, 2023
GSE253593	A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	15	JPG MTX TSV	Brent Hanks	May 13, 2024
GSE253589	A Lactate-induced SREBF2-dependent genetic program drives an immunotolerant dendritic cell population during cancer progression [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED MTX TSV	Brent Hanks	May 13, 2024
GSE210639	A Mesp1-dependent developmental breakpoint in transcriptional and epigenomic specification of early cardiac precursors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	MTX TSV	Alexis Leigh Krup	Apr 07, 2023
GSE155882	A Transcriptional Switch Governs Fibroblast Activation in Heart Disease	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	56	BED BIGWIG BW CSV MTX TSV WIG SRA Run Selector	Pawel Przytycki	Apr 08, 2021
GSE245549	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BW MTX TAB TSV	Shuchang Liu	Jun 06, 2024
GSE245538	A cis-regulatory module underlies retinal ganglion cell genesis and axonogenesis [Set1.Sc-ATAC-Seq retina E14.5 WT retina]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	MTX TSV	Shuchang Liu	Jun 06, 2024
GSE230438	A memory-like T follicular helper cell subset revealed by single-cell transcriptomic analysis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW MTX TSV TXT	Chen Dong	Nov 16, 2023
GSE172250	A mouse model for assessing mTOR kinase-independent role and off-target effect of mTOR kinase inhibitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BED FPKM_TRACKING TSV	Yi Zheng	Aug 29, 2023
GSE205065	A novel lineage of RORγt+ antigen presenting cells instructs microbiota-dependent regulatory T cell differentiation and tolerance during early life [multiome scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	TBI TSV	Chrysothemis Brown	Sep 06, 2022
GSE196993	A palmitate-rich metastatic niche enables metastasis growth via p65 acetylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	37	BW MTX NARROWPEAK TAR TSV	Juan Fernández-García	Jun 01, 2022
GSE185215	A phenotypic screening platform for identifying chemical modulators of astrocyte reactivity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	97	BROADPEAK BW MTX NARROWPEAK TSV	Benjamin L.L. Clayton	Jan 10, 2024
GSE154175	A primed immune transcriptional program is activated in oligodendroglia in multiple sclerosis [SCATAC_10X]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED CSV H5 RDS TSV WIG SRA Run Selector	Eneritz Agirre	May 21, 2021
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE250485	A reversible epigenetic memory of inflammatory injury controls lineage plasticity and tumor initiation in the mouse pancreas [scATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TSV	Rohit Chandwani	Dec 19, 2023
GSE155430	A single-cell epigenetic atlas of human IDH-mutant glioma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED MTX TSV TXT	Aaron Diaz	Oct 20, 2021