GEO Browser - GEO

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93 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL24247	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		TBI
GSE141825	Single-cell ATAC-seq of mouse thymus iNKT cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BED CSV H5 MTX TBI TSV SRA Run Selector	Indra Adrianto	Jun 27, 2023
GSE158196	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 TBI TSV SRA Run Selector	Danielle R. Little	Mar 08, 2021
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78	BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE161132	Decoding Cortical Glial Cell Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	CSV H5 MTX TBI TSV SRA Run Selector	Guoping Liu	Feb 05, 2021
GSE169431	Transcriptional Activation of Regenerative Haematopoiesis via Niche Sensing	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus Mus musculus	42	H5 NARROWPEAK TBI TSV	Tomer Itkin	Apr 01, 2024
GSE178988	Transcriptional programs dictating Schwann cell transformation in MPNST [scATACseq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	3	CSV H5 TBI TSV SRA Run Selector	Lai Man (Natalie) Wu	Nov 07, 2022
GSE179043	Transcriptional programs dictating Schwann cell transformation in MPNST	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	50	CSV H5 TAR TBI TSV TXT	Lai Man (Natalie) Wu	Nov 07, 2022
GSE183310	Decoding the PITX2 controlled genetic network in atrial fibrillation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CSV H5 MTX TBI TSV TXT SRA Run Selector	Jeffrey D. Steimle	Apr 28, 2022
GSE188669	Divergent clonal differentiation trajectories of T cell exhaustion (scATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	TBI TSV SRA Run Selector	Ansuman T Satpathy	Jul 25, 2022
GSE188670	Divergent clonal differentiation trajectories of T cell exhaustion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	57	CSV TBI TSV	Ansuman T Satpathy	Jul 25, 2022
GSE189210	Parallel single cell multi-omics analysis of neonatal skin reveals transitional fibroblast states that restrict differentiation into distinct fates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED CSV H5 MTX TBI TSV SRA Run Selector	Sean Thompson	Nov 24, 2021
GSE190054	FoxP3 associates with enhancer-promoter loops to regulate Treg-specific gene expression [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED MTX TBI TSV TXT SRA Run Selector	CBDM Lab	Dec 07, 2021
GSE190057	FoxP3 associates with enhancer-promoter loops to regulate Treg-specific gene expression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED HIC MTX TBI TSV TXT	CBDM Lab	Dec 03, 2021
GSE190795	IL-9 is required for multi-cytokine producing tissue-resident memory CD4+ T cell-dependent allergic airway recall responses	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	14	CSV H5 TBI TSV SRA Run Selector	Rakshin Kharwadkar	Jan 31, 2022
GSE192597	Single nuclei RNA sequencing of skin draining lymph nodes in the setting of skin inflammation and RAG1 fate mapping	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	H5 TBI TSV	Aaron Ver Heul	Apr 28, 2024
GSE193238	A primed immune transcriptional programme is activated in oligodendroglia in multiple sclerosis [ATAC-Seq and RNA-Seq]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BEDPE H5 RDS TBI TSV WIG	Eneritz Agirre	Jan 28, 2022
GSE194226	Single cell ATAC-seq of mouse retinal CX3CR1+ myeloid cells for Naive, PBS and 4xLPS treatment	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED CSV MTX TBI TSV	Mike Sapieha	Feb 22, 2023
GSE198730	Transcriptomics, Regulatory Syntax, and Enhancer Identification in Heterogenous Populations of Mesoderm-Induced ESCs at Single-Cell Resolution	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	39	BED CSV H5 HIC MTX TBI TSV XLSX	Vittorio Sartorelli	Jul 31, 2022
GSE198866	Single-cell chromatin accessibility profiling of mouse cardio-pharyngeal development under maternal diabetes mellitus	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TBI TSV	Tomohiro Nishino	Oct 16, 2023
GSE198905	Single-cell profiling of mouse cardio-pharyngeal development under maternal diabetes mellitus	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	TBI TSV	Tomohiro Nishino	Oct 16, 2023